Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., rod shape-determining protein RodA from Pseudomonas simiae WCS417

 Score =  404 bits (1037), Expect = e-117
 Identities = 195/356 (54%), Positives = 261/356 (73%), Gaps = 1/356 (0%)

Query: 13  LFERFHIDLPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILAQIPPR 72
           L +R HID PLL+ +L L    L V+YSASG++  ++ +QA    + L+ MV++AQ+ PR
Sbjct: 21  LLQRMHIDGPLLILLLTLAAGSLFVLYSASGKNWDLLIKQASSFGLGLLSMVVIAQLEPR 80

Query: 73  TYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDL-GFVRFQPSELLKLAVPLMVARYI 131
                 P+ +  GV+LLV V + G  + GA RW+++ G +RFQPSE +K+ +P  +A Y+
Sbjct: 81  FMARWVPLGYVAGVLLLVVVDVMGHNAMGATRWINIPGVIRFQPSEFMKILMPATIAWYL 140

Query: 132 GKHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLITAAA 191
            K  LPP  K +  SL+++ VP ILI +QPDLGTS+LI A G FV+F+ G+ W+ I +  
Sbjct: 141 SKRTLPPQLKHVGISLILIGVPFILIVRQPDLGTSLLILAGGAFVLFMGGLRWRWILSVL 200

Query: 192 VAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGKGWLHG 251
            A       +WFF MH+YQK R+ T  DPESDPLG G++IIQSK AIGSGG+ GKGWL G
Sbjct: 201 AAAVPVAVAMWFFFMHDYQKQRILTFLDPESDPLGTGWNIIQSKAAIGSGGVFGKGWLLG 260

Query: 252 TQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRMMAG 311
           TQS L+FLPE HTDFI AV+ EE+G++GI  LL +YL +IGRGL + + AQT FG+++AG
Sbjct: 261 TQSHLDFLPESHTDFIIAVMGEEFGLVGICALLLIYLLLIGRGLVITAQAQTLFGKLLAG 320

Query: 312 SIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHRK 367
           ++ ++FFVYVFVNIGMVSG+LPVVGVPLP ISYGGTS+VTL++ FG+LMSIHTHRK
Sbjct: 321 ALTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSAFGVLMSIHTHRK 376