Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., murein transpeptidase factor from Pseudomonas putida KT2440

 Score =  404 bits (1038), Expect = e-117
 Identities = 198/361 (54%), Positives = 266/361 (73%), Gaps = 2/361 (0%)

Query: 9   QNRALF-ERFHIDLPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILA 67
           + RA F +R HID PLL+ +L L    L V+YSASG++  ++ +QA    + L+ M ++A
Sbjct: 9   RRRASFLQRIHIDGPLLIILLTLAAGSLFVLYSASGKNWDLLLKQATSFGIGLVSMFVIA 68

Query: 68  QIPPRTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDL-GFVRFQPSELLKLAVPLM 126
           Q+ PR      P+ +  GV+LLV V + G  + GA RW+++ G +RFQPSE +K+ +P  
Sbjct: 69  QLEPRFMARWVPLAYLAGVLLLVVVDVMGHNAMGATRWINIPGVIRFQPSEFMKIIMPAT 128

Query: 127 VARYIGKHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKL 186
           +A Y+ K  LPP  K +  SLV++ VP +LI +QPDLGT++LI ASG FV+F+ G+ W+ 
Sbjct: 129 IAWYLSKRTLPPHLKHVAISLVLIGVPFMLIVRQPDLGTALLILASGAFVLFMGGLRWRW 188

Query: 187 ITAAAVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGSGGLSGK 246
           I +   A       +WFF+MH+YQK RV T  DPESDPLG G++IIQSK AIGSGG+ GK
Sbjct: 189 ILSVLAAAVPVAVAMWFFVMHDYQKQRVLTFLDPESDPLGTGWNIIQSKAAIGSGGVFGK 248

Query: 247 GWLHGTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFG 306
           GWL GTQS L+FLPE HTDFI AV+ EE+G++GI +LL +YL +IGRGL + + AQT FG
Sbjct: 249 GWLLGTQSHLDFLPESHTDFIIAVLGEEFGLVGICLLLIVYLLLIGRGLVITAQAQTLFG 308

Query: 307 RMMAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSIHTHR 366
           +++AGS+ ++FFVYVFVNIGMVSG+LPVVGVPLP ISYGGTS+VTL++ FG+LMSIHTHR
Sbjct: 309 KLLAGSLTMTFFVYVFVNIGMVSGLLPVVGVPLPFISYGGTSLVTLLSAFGVLMSIHTHR 368

Query: 367 K 367
           K
Sbjct: 369 K 369