Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., putative lipid II flippase FtsW from Magnetospirillum magneticum AMB-1

 Score =  150 bits (379), Expect = 5e-41
 Identities = 103/343 (30%), Positives = 167/343 (48%), Gaps = 9/343 (2%)

Query: 21  LPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMALIIMVILAQIPPRTYESAAPI 80
           L + +G +  M     V      QS   + RQ M +A A+IIM+ ++ + P+     A I
Sbjct: 30  LLVAVGAILTMAASPAVAERIGAQSFHFVRRQFMFLAPAIIIMLGVSLLAPKQVRRMAVI 89

Query: 81  LFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLKLAVPLMVARYIGKHALPPSF 140
                ++LL  V + G   KGA+RWL+L  +  QPSE +K    ++ A       L P+F
Sbjct: 90  GLLGSILLLAVVPVLGGEIKGAKRWLNLAGISIQPSEFVKPMFAVVSAWMFASARLDPAF 149

Query: 141 KTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLAGISWKLITAAAVAIGAFVPV 200
                +  +  +   L+  QPD+G + ++ A      FLAG+   L+    +A    +  
Sbjct: 150 PGRIIATALFGLVAALLLIQPDVGQTAILTAIWGTQFFLAGLPLILVVGLGLAAPIGIVG 209

Query: 201 LWFFLMHEYQKTRVRTLFDPESDPLGAG-YHIIQSKIAIGSGGLSGKGWLHGTQSQLEFL 259
            ++   H      V+  FD   DP G+G Y +  +  A  +GGL GKG   G    +  L
Sbjct: 210 AYYVFPH------VQARFDKFLDPSGSGAYQVTTALNAFKNGGLFGKGPGEGRVKLV--L 261

Query: 260 PERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASHAQTSFGRMMAGSIVLSFFV 319
           P+ HTDFI AV  EE+G++  L ++ L+ FI+ RG          F  +    +++ F +
Sbjct: 262 PDAHTDFILAVGGEEFGVLMCLFVVMLFAFIVLRGFSRIHKDDNLFVVLATAGLLVQFGL 321

Query: 320 YVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILMSI 362
              VN+     ++P  G+ LP ISYGG+SMV L  G G+++++
Sbjct: 322 QAIVNMASTLRMMPAKGMTLPFISYGGSSMVALALGMGMVLAL 364