Pairwise Alignments

Query, 373 a.a., rod shape-determining protein RodA from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., Rod shape-determining protein RodA from Alteromonas macleodii MIT1002

 Score =  462 bits (1189), Expect = e-135
 Identities = 225/371 (60%), Positives = 287/371 (77%)

Query: 1   MKMDPATGQNRALFERFHIDLPLLLGVLALMGFGLVVMYSASGQSLAMMDRQAMRMAMAL 60
           MK         +  +R HID  LL+G+L L   GL  +YSASGQ +  M+RQ +R+  + 
Sbjct: 1   MKRTTINPNKISFLQRIHIDGWLLVGLLVLSCVGLFTLYSASGQDMEQMERQFIRLGFSF 60

Query: 61  IIMVILAQIPPRTYESAAPILFFCGVILLVCVLLFGEISKGAQRWLDLGFVRFQPSELLK 120
           I+M  LAQ P   +   +   +  G+++L+ VLLFG++ KGAQRWLDLGF+RFQPSEL+K
Sbjct: 61  IVMFGLAQAPLGVFRFFSTYAYGAGLLMLIAVLLFGDMGKGAQRWLDLGFIRFQPSELMK 120

Query: 121 LAVPLMVARYIGKHALPPSFKTLFASLVMVFVPTILIAKQPDLGTSILIAASGIFVIFLA 180
           LAVP+MVA YI K  +PP    +     +V VPTILIAKQPDLGTS+LIA+SGIF IFLA
Sbjct: 121 LAVPMMVAWYISKFTMPPRTTHIIVGFGLVVVPTILIAKQPDLGTSLLIASSGIFAIFLA 180

Query: 181 GISWKLITAAAVAIGAFVPVLWFFLMHEYQKTRVRTLFDPESDPLGAGYHIIQSKIAIGS 240
           G+SW+LI+     IGAF PV+WFFLM +YQK RV T  +PESDPLG+GYHIIQSKIAIGS
Sbjct: 181 GMSWRLISVVGGLIGAFAPVMWFFLMKDYQKQRVLTFLNPESDPLGSGYHIIQSKIAIGS 240

Query: 241 GGLSGKGWLHGTQSQLEFLPERHTDFIFAVIAEEWGMIGILVLLSLYLFIIGRGLYLASH 300
           GG+ GKGWLHGTQSQLEFLPERHTDFIF+V +EE+G+ G++ L+++Y+FII RGL ++S 
Sbjct: 241 GGVDGKGWLHGTQSQLEFLPERHTDFIFSVFSEEFGLTGVMCLMAIYIFIIMRGLIISSR 300

Query: 301 AQTSFGRMMAGSIVLSFFVYVFVNIGMVSGILPVVGVPLPLISYGGTSMVTLMAGFGILM 360
           AQ ++ +++ GSI L+FFVYVFVN+GMVSG+LPVVGVPLPL+S+GGTSMVTLMAGFGILM
Sbjct: 301 AQDAYAKLLGGSITLTFFVYVFVNMGMVSGLLPVVGVPLPLVSFGGTSMVTLMAGFGILM 360

Query: 361 SIHTHRKAFSK 371
           +I T ++  S+
Sbjct: 361 AIATQKRLMSR 371