Pairwise Alignments

Query, 263 a.a., septal ring lytic transglycosylase RlpA from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., lipoprotein from Pseudomonas simiae WCS417

 Score =  157 bits (396), Expect = 4e-43
 Identities = 96/238 (40%), Positives = 130/238 (54%), Gaps = 9/238 (3%)

Query: 29  DQAPDTPLSVEHIEDAHPQYEPYSFGGNKDYNLRGKSYRIIKNPKGFTESGKASWYGKKF 88
           D AP   + V  I DA P      +  N  Y + GKSY  ++  K + +SG ASWYG KF
Sbjct: 56  DGAPWWDVDVSKIPDATPTLHTGPYKANP-YTVLGKSYFPLQESKTYVQSGTASWYGTKF 114

Query: 89  HGHLTSNGEIYDMYSMTAAHKTLPIPSYVKVTNTDNGKSTVVRVNDRGPFHDGRIIDLSY 148
           HG  T+NGE+YD+Y M+AAHKTLP+PSYV+VTN DN ++ ++RVNDRGPF+  RIIDLSY
Sbjct: 115 HGQNTANGEVYDLYGMSAAHKTLPLPSYVRVTNLDNNRTVILRVNDRGPFYSDRIIDLSY 174

Query: 149 AAAYKIGVVQAGTANVRIEVITV----DKPTKPRPKSKNNALEYVIQVVSSQ-HIER-VR 202
           AAA K+G  + GTA V++E I       +  KP P   N       QV +S   IE+   
Sbjct: 175 AAAKKLGYAETGTARVKVEGIDPAQYWAQRGKPAPLMLNEPQTQQPQVTASTGKIEQWTP 234

Query: 203 TLAQNLGQNLSAPSFVESTNNTHRLFL--GPFTDDDLTQTLLEQVKSAGYDSAFIKTI 258
             AQ+    +  P      +     +L  G F + D  + L  ++        FI +I
Sbjct: 235 PPAQHAPDTVVVPHAAPGASMAGGQYLQVGAFANPDAAELLRSKLSGMVNAPVFISSI 292