Pairwise Alignments

Query, 263 a.a., septal ring lytic transglycosylase RlpA from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., endolytic peptidoglycan transglycosylase RlpA from Erwinia tracheiphila SCR3

 Score =  141 bits (356), Expect = 2e-38
 Identities = 73/172 (42%), Positives = 108/172 (62%), Gaps = 5/172 (2%)

Query: 1   MNRIYLYL-LIVLILAGCSSPGGRYDMSDDQAPDTPLSVEHIEDAHPQYEPYSFGGNKDY 59
           M + +L++ L   +L  CS+      M   Q P     V  I    P+YEP + G N+DY
Sbjct: 1   MRKDWLWISLAAALLTACSTT--EQQMPAPQQPAYNGPVVEIGGVEPRYEPPAAGANQDY 58

Query: 60  NLRGKSYRIIKNPKGFTESGKASWYGKKFHGHLTSNGEIYDMYSMTAAHKTLPIPSYVKV 119
           ++ GK YRI+K P  F+E+G A+WYG +  G+ T++GE +D  ++TAAH TLPIP YV+V
Sbjct: 59  SVNGKKYRIVKEPSNFSETGLATWYGDEAKGNRTASGEQFDPEALTAAHPTLPIPGYVRV 118

Query: 120 TNTDNGKSTVVRVNDRGPFHDGRIIDLSYAAAYKIGVVQAGTANVRIEVITV 171
           TN  NG+  VVR+NDRGP+  GR+IDLS AA  ++ +  +    V+++ I+V
Sbjct: 119 TNLANGRQLVVRINDRGPYTAGRVIDLSKAAGDRLNI--SNNTRVKVDYISV 168



 Score = 39.7 bits (91), Expect = 9e-08
 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 4/103 (3%)

Query: 157 VQAGTANVRIEV----ITVDKPTKPRPKSKNNALEYVIQVVSSQHIERVRTLAQNLGQNL 212
           V A TA    EV    + V   T P  ++      + +QV +     R R L   L +  
Sbjct: 265 VAAATATESQEVHPAAVAVSPATAPASRATPGGTSWAVQVGAVSDPARARQLLNTLSKKF 324

Query: 213 SAPSFVESTNNTHRLFLGPFTDDDLTQTLLEQVKSAGYDSAFI 255
                VE+ NN +R+ LG F+       L +++ S    S+FI
Sbjct: 325 GVSGTVENHNNVYRVQLGHFSSRQQASVLQQRLSSEVNQSSFI 367