Pairwise Alignments

Query, 263 a.a., septal ring lytic transglycosylase RlpA from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., endolytic peptidoglycan transglycosylase RlpA from Dickeya dianthicola ME23

 Score =  141 bits (356), Expect = 2e-38
 Identities = 74/162 (45%), Positives = 106/162 (65%), Gaps = 3/162 (1%)

Query: 10  IVLILAGCSSPGGRYDMSDDQAPDTPLSVEHIEDAHPQYEPYSFGGNKDYNLRGKSYRII 69
           I L LAGC+    +   S  QA      VE I  A P+YEPY     +DY + GK+Y I+
Sbjct: 11  ISLALAGCAVTE-QPQSSSPQATAYNGPVEEIGGAEPRYEPYKPANMQDYGMNGKTYHIV 69

Query: 70  KNPKGFTESGKASWYGKKFHGHLTSNGEIYDMYSMTAAHKTLPIPSYVKVTNTDNGKSTV 129
           KNP+ F+ESG A+W+ ++  G+ T+ GE +D+ +M+AAH TLPIPSYV+VTN  NG+  V
Sbjct: 70  KNPENFSESGFATWHDRESVGNRTATGEEFDVNAMSAAHPTLPIPSYVRVTNLSNGRRLV 129

Query: 130 VRVNDRGPFHDGRIIDLSYAAAYKIGVVQAGTANVRIEVITV 171
           VR+NDRGP+  GRIIDL+  AA ++ +  +    V+++ I+V
Sbjct: 130 VRINDRGPYTPGRIIDLTKGAADRLNL--SNNTKVKVDFISV 169



 Score = 37.4 bits (85), Expect = 5e-07
 Identities = 22/85 (25%), Positives = 38/85 (44%)

Query: 175 TKPRPKSKNNALEYVIQVVSSQHIERVRTLAQNLGQNLSAPSFVESTNNTHRLFLGPFTD 234
           T  +P     A   V+QV +    +R +T  ++L +    P  V   N  +R+ LGPF  
Sbjct: 300 TLSQPAVPAGAGNIVVQVGALSDQQRAQTWLKSLNERFRVPGKVTLNNGLYRIQLGPFQS 359

Query: 235 DDLTQTLLEQVKSAGYDSAFIKTIN 259
                 L +++ S     +FI T++
Sbjct: 360 RQHAADLQQRLSSEAQQPSFITTVS 384