Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  155 bits (393), Expect = 2e-42
 Identities = 89/242 (36%), Positives = 139/242 (57%), Gaps = 4/242 (1%)

Query: 39  AKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAW 98
           A   +L++  +G+V+ +KE      PAS+TK+MT YV    V+ G +  +  + +S  A 
Sbjct: 78  ANPILLVEADTGRVIEQKEAGRPWHPASVTKLMTVYVALNAVRNGRLKFDTPITVSPAAA 137

Query: 99  AKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASS 158
           A+     SKM  +VGT V + +  + ++++S ND    + E VAG+  AFV  MNA A+ 
Sbjct: 138 AQQ---PSKMGFKVGTVVTLDNALKMVLVKSANDMAWLVGEGVAGSMPAFVAEMNATAAH 194

Query: 159 LGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRN 218
           LGM  +HF N +GL DP   +T  DLA+L +A+I   PE+ A++         +   N N
Sbjct: 195 LGMTGTHFENPNGLPDPAQVTTARDLAILARAIIYHFPEQEALFRIPAIKIGKVVLRNYN 254

Query: 219 GLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYG 278
            L+ D+    DG+KTG   G+GYNLV++AT GN RL+AV++G  +  AR  ++  +   G
Sbjct: 255 RLI-DRYPGADGMKTGFVCGSGYNLVATATRGNKRLIAVILGARSGTARTEQAALMFEKG 313

Query: 279 FR 280
           F+
Sbjct: 314 FQ 315