Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., D-alanyl-D-alanine endopeptidase from Pseudomonas simiae WCS417

 Score = 73.6 bits (179), Expect = 7e-18
 Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 31/283 (10%)

Query: 12  SSITLSITLSSTAFASPIVTPDAP------QIAAKGYVLMDYHSGKVLAEKEMDTKLSPA 65
           S ++L    + T FA    T  AP      QIA+   +L+D  + KV+     D  +  A
Sbjct: 6   SLVSLLFAFTGT-FAHAAETTQAPRDTSKLQIASGSAMLVDLQTNKVIYSSNPDVVVPIA 64

Query: 66  SLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMF--VEVGTTVKVSDLNR 123
           S++K+MT  V+  E K+     N D  I  N   K+ P+   +F  V++G+ +   ++  
Sbjct: 65  SVSKLMTGLVV-LEAKQ-----NMDEYIDINI--KDTPEMKGVFSRVKIGSEMPRKEMLL 116

Query: 124 GIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYD 183
             ++ S N A  ++A H  G   AF+  MNA A +LGM ++H+    GL   N+ ST  D
Sbjct: 117 IALMSSENRAAASLAHHYPGGYPAFIAAMNAKAKALGMTSTHYVEPTGLSIHNV-STARD 175

Query: 184 LALLGQAL--------IRDVPEEYAIYSEQKFTYN-GITQYNRNGLLWDKSMNVDGIKTG 234
           L+ L  A         +    E+   + +  +T     T +  N   WD  +     KTG
Sbjct: 176 LSKLLAAARHYPLLSQLSTTKEKTVSFRKPNYTLGFSNTDHLINRANWDIKLT----KTG 231

Query: 235 HTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSY 277
            T+ AG+ LV     GN  +  V++    +    A++ ++ ++
Sbjct: 232 FTNQAGHCLVLVTNMGNRPVSLVILDAFGKFTHFADASRIRNW 274