Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Sphingobium sp. HT1-2

 Score =  226 bits (577), Expect = 7e-64
 Identities = 143/392 (36%), Positives = 212/392 (54%), Gaps = 16/392 (4%)

Query: 6   LKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPA 65
           +K  +A+++ + +       A+P  T +AP IA     L D  SG VL +K  +T++ PA
Sbjct: 1   MKKTVAATLFVGLLAQPLVAAAPPYTSEAP-IA----YLKDLSSGAVLYDKGGETRMPPA 55

Query: 66  SLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAK-NFPDS-SKMFVEVGTTVKVSDLNR 123
           S+ KMMT++V  + +++G + L+    +    W + + P + S MF+ VG  V V +L  
Sbjct: 56  SMAKMMTAHVAFRLIQKGELKLDTKFTVRPETWQQWHGPKAGSTMFLSVGEQVSVENLLH 115

Query: 124 GIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNL-YSTPY 182
           GI+  SGNDACV +AE +AGTE AFV LMN  A  +G+KNSHF  S+G  D  + Y T  
Sbjct: 116 GIVTLSGNDACVVLAEGIAGTEQAFVALMNEEAKRMGLKNSHFGTSNGWPDEGVTYVTAE 175

Query: 183 DLALLGQALIRDVPEEYA-IYSEQKFTY------NGITQYNRNGLLWDKSMNVDGIKTGH 235
           DLA L +A I + P+ Y   Y+ + FT+      + I Q NRN +L  K    DG+KTGH
Sbjct: 176 DLAKLAEATIVETPDLYKKFYATRSFTWGKTMGGSDIAQANRNPIL-GKIAGADGLKTGH 234

Query: 236 TSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFV 295
           T  AG+    SA +   RLV VV G  + N R  ES + + +GFR ++     K G+T  
Sbjct: 235 TEEAGFGFTGSAEQDGRRLVMVVAGLTSFNGRITESVRFMDWGFRAWKAQPLFKKGQTVE 294

Query: 296 NETIWMGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLEKQLKAPLKKGDIVGTLYYQLA 355
              + +G   T++L   ++  VT+PR  + ++    V    +KAP+ KG  +  L  Q  
Sbjct: 295 TAAVQLGSASTVSLVAPQNMAVTMPRTASANVKVKVVYTGPIKAPIAKGQQIAQLIVQTP 354

Query: 356 GNDIAQYPLLALEDVQEGSLFSRLWDYLVLLF 387
                  PL+A EDV E  +F RLW+ L   F
Sbjct: 355 DTPPQVLPLVAGEDVAEAGIFGRLWNGLKSFF 386