Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., Murein-DD-endopeptidase (EC 3.4.99.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 20/240 (8%)

Query: 43  VLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNF 102
           +++D  + +VL  K     L  ASLTK+MT  V+       ++++ + + I+++     F
Sbjct: 144 LVVDQETNEVLFSKNDAAVLPIASLTKLMTGLVVAD----AHLNMQEMITITQDD-VDTF 198

Query: 103 PDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMK 162
             SS     VGTT+   +L    ++ S N A  A+     G    FV LMN  A  LGM 
Sbjct: 199 KGSSSRLA-VGTTLSRGELMHLALMSSENRAAHALGRTYPGGLSEFVRLMNRKALELGMA 257

Query: 163 NSHFTNSHGLDDPNLYSTPYDLALLGQA-----LIRDV---PEEYAIYSEQKFTYNGITQ 214
           ++ +    GL   N  S+  DLA L  A     ++RD+   P        +   YN    
Sbjct: 258 DTRYVEPTGLSSSN-QSSARDLATLVSAAYQRPILRDLSTSPSYEVDLGRRTLHYN---- 312

Query: 215 YNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKL 274
            N NGL+ + S ++   KTG+ S AG  LV  A     +L+ V +    +  R  +++++
Sbjct: 313 -NSNGLIKNPSWDIGLQKTGYISEAGRCLVMQAKVAGRQLIMVFLDATGKVGRMQDAERV 371