Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., D-alanyl-D-alanine carboxypeptidase from Magnetospirillum magneticum AMB-1

 Score =  145 bits (365), Expect = 3e-39
 Identities = 88/258 (34%), Positives = 136/258 (52%), Gaps = 4/258 (1%)

Query: 34  APQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVI 93
           A +  +  ++ +D  SG V+AE        PASLTKMMT+YV    +K G +S +D + +
Sbjct: 25  AARAESAAFLAVDLGSGAVIAESRGGAPHHPASLTKMMTAYVAFAAIKAGKVSQDDVITV 84

Query: 94  SKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMN 153
           S+ A ++     + + +  G  + +    + +I++S NDA VA+AEHV G+E AF   M 
Sbjct: 85  SERAASQG---GASLDLRPGERITLGAALKAMIVRSANDAAVAVAEHVGGSESAFASRMT 141

Query: 154 AWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGIT 213
             A+ LGM +S F N+ G+      S+P D+A+L  A+ RD P    ++S +  T+ G  
Sbjct: 142 EEAARLGMTSSSFRNASGMTAGGHVSSPRDMAVLAMAIERDFPTFRPLFSSRDTTWKGRV 201

Query: 214 QYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKK 273
               NG L       +G+KTG T  AGYNLV+ A  G  R +AVVMG ++   R    ++
Sbjct: 202 LPTVNGFL-GAYAGAEGMKTGFTCSAGYNLVAIAHRGGRRALAVVMGAESSAQRLGAIRR 260

Query: 274 LLSYGFRFFETVAPHKAG 291
           L+    +   T     AG
Sbjct: 261 LMDQALQATPTAGRPLAG 278