Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., serine-type D-Ala-D-Ala carboxypeptidase DacD from Serratia liquefaciens MT49

 Score =  339 bits (870), Expect = 7e-98
 Identities = 176/389 (45%), Positives = 256/389 (65%), Gaps = 6/389 (1%)

Query: 1   MKKSILKSVLASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDT 60
           MK+S+   V+ + + + + + +    S I     P I A  YVLMDY +G+VLA+   D 
Sbjct: 1   MKRSVW--VMIAGMLVPLAVQAADVPSSIAQNTPPAIDAASYVLMDYTTGQVLAQANADQ 58

Query: 61  KLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKN---FPDSSKMFVEVGTTVK 117
           + +PASLTK+MT  VI   + +  I L+D V +  +AWA+    F  SS MF++ G  V 
Sbjct: 59  RRNPASLTKLMTGLVIDHALDQHKIGLDDVVTVGNDAWAQGNPVFKGSSLMFLKPGDRVT 118

Query: 118 VSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNL 177
           V DL+RGIII SGNDACVAMA++VAG + AFV LMN  ++ LG++N+HF   HGLD P  
Sbjct: 119 VRDLSRGIIIDSGNDACVAMADYVAGNQAAFVKLMNEKSAQLGLQNTHFETVHGLDAPGQ 178

Query: 178 YSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTS 237
           ++T  DLA++ +A+I   P EY +YSE+  T+NGITQ NRNGLLWDK+++VDG+KTGHT+
Sbjct: 179 FTTAGDLAVISRAIIMSEPAEYHMYSEKSLTWNGITQQNRNGLLWDKNLHVDGLKTGHTA 238

Query: 238 GAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNE 297
            AG+N+++SATEG+ RL+AVVMG  +   R+ +++KLL++G R F TV    AG+    E
Sbjct: 239 SAGFNIIASATEGDRRLIAVVMGGKSSKGREEQARKLLTWGLRDFTTVHLFSAGQNLGQE 298

Query: 298 TIWMGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLE-KQLKAPLKKGDIVGTLYYQLAG 356
            +W GD+  +A+G  K+ Y++LP+ +A  L A +V+   +L APL +G  +G +     G
Sbjct: 299 KVWYGDRHEVAVGSAKEEYLSLPKSEADKLKAQYVVSVPRLDAPLTQGQTIGEIRISDNG 358

Query: 357 NDIAQYPLLALEDVQEGSLFSRLWDYLVL 385
             +   PL+ L+ VQ+G  FSRL DY+ L
Sbjct: 359 KLLKTLPLVVLQPVQQGGAFSRLMDYVKL 387