Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  399 bits (1025), Expect = e-116
 Identities = 198/351 (56%), Positives = 259/351 (73%), Gaps = 4/351 (1%)

Query: 45  MDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFP- 103
           MDY SGKVLAE   D KL PASLTK+MTSYV+GQ +K G I L D V + K+AWA   P 
Sbjct: 1   MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLTDMVTVGKDAWATGNPA 60

Query: 104 --DSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGM 161
              SS MF++ G  V V+DLN+GIIIQSGNDAC+A+A++VAG++++F+ LMNA+A  LG+
Sbjct: 61  LRGSSVMFLKPGDQVSVADLNKGIIIQSGNDACIALADYVAGSQESFIGLMNAYAKRLGL 120

Query: 162 KNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLL 221
            N+ F   HGLD P  +ST  D+ALLG+ALI DVP+EYAI+ E++FT+N I Q NRN LL
Sbjct: 121 TNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPDEYAIHKEKEFTFNNIRQPNRNRLL 180

Query: 222 WDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRF 281
           W  +++VDG+KTG T+GAGYNLV+SAT+G+MRL++VV+G   +  R  ES+KLL++GFRF
Sbjct: 181 WSTNLHVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRF 240

Query: 282 FETVAPHKAGETFVNETIWMGDKDTIALGVDKDTYVTLPRGQAKDLTASFVL-EKQLKAP 340
           FETV P K   TFV + +W GDK  + LG      VT+PRGQ K+L ASF L E QL AP
Sbjct: 241 FETVTPIKPDATFVTQRVWFGDKHEVNLGAGDAGSVTIPRGQLKNLKASFTLNEPQLTAP 300

Query: 341 LKKGDIVGTLYYQLAGNDIAQYPLLALEDVQEGSLFSRLWDYLVLLFKSWF 391
           LKKG +VGT+ +QL G  I Q PL+ +E+V+EG  FSR+WD++++    WF
Sbjct: 301 LKKGQVVGTIDFQLNGKSIEQRPLMVMENVEEGGFFSRMWDFVLMKLHQWF 351