Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Murein-DD-endopeptidase (EC 3.4.99.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 76.6 bits (187), Expect = 8e-19
 Identities = 72/276 (26%), Positives = 127/276 (46%), Gaps = 28/276 (10%)

Query: 16  LSITLSSTAFASPIVTPDA--PQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTS 73
           L++  +  A A    T  A  P+IA+   +++D ++ KV+     D     AS+TK+MT+
Sbjct: 2   LAVPFAPQAVAKTAATTAASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASITKLMTA 61

Query: 74  YVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGII--IQSGN 131
            V    V    + L++ + +         P+   ++  V    ++S  N  ++  + S N
Sbjct: 62  MV----VLDARLPLDEILKVD----ISQTPEMKGVYSRVRLNSEISRKNMLLLALMSSEN 113

Query: 132 DACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLA------ 185
            A  ++A +  G  +AF+  MNA A +LGM ++ F    GL   N+ ST  DL       
Sbjct: 114 RAAASLAHYYPGGYNAFIKAMNAKAKALGMTHTRFVEPTGLSIHNV-STARDLTKLLIAT 172

Query: 186 ----LLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGY 241
               L+GQ  +    E+ A +S   +T   +   N N L++  + N+   KTG T+ AG+
Sbjct: 173 KQYPLIGQ--LSTTREDMATFSHPAYT---LPFRNTNHLVYRDNWNIQLTKTGFTNAAGH 227

Query: 242 NLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSY 277
            LV      N  +  VVM    +    A++ +L ++
Sbjct: 228 CLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 263