Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., penicillin-binding protein 7 (VIMSS) from Escherichia coli BW25113

 Score = 82.0 bits (201), Expect = 2e-20
 Identities = 73/280 (26%), Positives = 126/280 (45%), Gaps = 26/280 (9%)

Query: 10  LASSITLSITLSSTAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTK 69
           LA  + +     + A  +   T   P+IA+   +++D ++ KV+     D     AS++K
Sbjct: 11  LALMLAVPFAPQAVAKTAAATTASQPEIASGSAMIVDLNTNKVIYSNHPDLVRPIASISK 70

Query: 70  MMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVS--DLNRGIII 127
           +MT+ V    V    + L++ + +         P+   ++  V    ++S  D+    ++
Sbjct: 71  LMTAMV----VLDARLPLDEKLKVD----ISQTPEMKGVYSRVRLNSEISRKDMLLLALM 122

Query: 128 QSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLA-- 185
            S N A  ++A H  G   AF+  MNA A SLGM N+ F    GL   N+ ST  DL   
Sbjct: 123 SSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTRFVEPTGLSVHNV-STARDLTKL 181

Query: 186 --------LLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTS 237
                   L+GQ  +    E+ A +S   +T   +   N N L++  + N+   KTG T+
Sbjct: 182 LIASKQYPLIGQ--LSTTREDMATFSNPTYT---LPFRNTNHLVYRDNWNIQLTKTGFTN 236

Query: 238 GAGYNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSY 277
            AG+ LV      N  +  VVM    +    A++ +L ++
Sbjct: 237 AAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW 276