Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., D-alanyl-D-alanine carboxypeptidase from Enterobacter asburiae PDN3

 Score =  338 bits (866), Expect = 2e-97
 Identities = 176/384 (45%), Positives = 254/384 (66%), Gaps = 11/384 (2%)

Query: 5   ILKSVLASSITLSITLSSTAFASPI-VTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLS 63
           I  S+LASS+      SS   A P+  +P  P I A  +VLMDY +G++L       + +
Sbjct: 7   IAVSLLASSV------SSAFAAEPLDFSPQPPAIQAGSWVLMDYTTGQILTAGNEHQQRN 60

Query: 64  PASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKN---FPDSSKMFVEVGTTVKVSD 120
           PASLTK+MT YV+ + +    I+ +D V + ++AWAK    F  SS MF++ G  V V D
Sbjct: 61  PASLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKGNPVFDGSSLMFLKEGDRVSVRD 120

Query: 121 LNRGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYST 180
           L+RG+I+ SGNDACVA+A+HVAG +  FV +MN +   L ++++HF   HGLD P  +S+
Sbjct: 121 LSRGLIVDSGNDACVALADHVAGGQPQFVKMMNDYVQKLNLRDTHFETVHGLDAPGQHSS 180

Query: 181 PYDLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAG 240
            YDLA+L +A+I   PE Y +YSE+  T+NGITQ NRNGLLWDK+MNVDG+KTGHTSGAG
Sbjct: 181 AYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMNVDGLKTGHTSGAG 240

Query: 241 YNLVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFRFFETVAPHKAGETFVNETIW 300
           +NL++SA +G  RL+AVVMG D+   R+ +++KLL +G + F+TV    +G+    E IW
Sbjct: 241 FNLIASAVDGQRRLIAVVMGADSPKGREDQARKLLHWGQQNFDTVQILHSGKKVGTERIW 300

Query: 301 MGDKDTIALGVDKDTYVTLPRGQAKDLTASFVLE-KQLKAPLKKGDIVGTLYYQLAGNDI 359
            GDK+ + LG D+D ++ LP+ +  ++ A +VL+ K+L+AP+     VG +        +
Sbjct: 301 YGDKEQVKLGTDQDFWLALPKAEVPNIKAKYVLDKKELEAPIAAHQRVGEIQLYDRDKVV 360

Query: 360 AQYPLLALEDVQEGSLFSRLWDYL 383
           A +PL+ LE V +G LFSR+ DYL
Sbjct: 361 AHWPLVTLEAVDKGGLFSRMSDYL 384