Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  156 bits (394), Expect = 1e-42
 Identities = 96/278 (34%), Positives = 158/278 (56%), Gaps = 7/278 (2%)

Query: 4   SILKSVLASSITLSITLSST-AFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKL 62
           ++L S+   ++ +++ L+   A A   V   +  +AA+  +LMD  SGKV+  +  DT  
Sbjct: 9   TLLLSLTVLTVLVAVLLTPLPALAKRSVKKTSGPVAAE--ILMDAGSGKVIQGRNADTLT 66

Query: 63  SPASLTKMMTSYVIGQEVKRGNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLN 122
            PASLTKMMT  +  + ++RG++ L+  +V+S++A +      S++++  G+T+ V    
Sbjct: 67  YPASLTKMMTLMLTFEALERGSLRLDQSLVVSQHAASM---PPSRLWLAPGSTITVEQAI 123

Query: 123 RGIIIQSGNDACVAMAEHVAGTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPY 182
             ++ +S ND  V + E + G+E AF   M A A +LGM+ + F N+ GL D    +T  
Sbjct: 124 LALVTRSANDVAVVLGEALGGSETAFAARMTARAHALGMRRTVFRNASGLPDRLQRTTAR 183

Query: 183 DLALLGQALIRDVPEEYAIYSEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYN 242
           D+A+L +ALIR     YA +  + F + G T Y  N L+  +   +DGIKTG+ + +G+N
Sbjct: 184 DMAILSRALIRGHARHYAYFQRRSFDWQGDTVYGHNRLM-ARYPGMDGIKTGYIAASGFN 242

Query: 243 LVSSATEGNMRLVAVVMGTDNENARKAESKKLLSYGFR 280
           L +SA     RL+AVVMG  + N+R      LL  GF+
Sbjct: 243 LAASAVRDGRRLIAVVMGGHSANSRDDRVADLLDAGFK 280