Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  147 bits (372), Expect = 4e-40
 Identities = 87/247 (35%), Positives = 141/247 (57%), Gaps = 5/247 (2%)

Query: 34  APQIAAKGY-VLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDDVV 92
           A  +AAK   +++D  +G+VL +++ D    PASLTKMMT Y+    ++ G ++L+  + 
Sbjct: 24  AEALAAKAAAIVVDARTGQVLIDQDADAITHPASLTKMMTLYLTFDALEDGRLTLDQQLP 83

Query: 93  ISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVDLM 152
           +S  +WA++   + K+ +  G T+KV     G++ +S NDA V +AE + GTE  F ++M
Sbjct: 84  VS--SWAESMTPT-KLGLRAGQTLKVETAILGLVTKSANDAAVVLAEALGGTESRFAEMM 140

Query: 153 NAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSEQKFTYNGI 212
              A  LGM+++ + N+ GL +    +T  D + L +AL+RD  + Y  +S + F Y G 
Sbjct: 141 TRKARELGMRHTVYRNASGLPNMEQVTTARDYSFLSRALMRDHAKYYPYFSRRNFVYGGR 200

Query: 213 TQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENARKAESK 272
           T  N N L+  +   +DGIKTG+T  +G+NL +SA     RLV VV+G  +  +R     
Sbjct: 201 TLANHNHLM-SRYEGMDGIKTGYTVASGFNLAASAVRDGRRLVGVVLGGKSAVSRDNRMA 259

Query: 273 KLLSYGF 279
            LL   F
Sbjct: 260 ALLDQAF 266