Pairwise Alignments

Query, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) from Agrobacterium fabrum C58

 Score =  157 bits (396), Expect = 7e-43
 Identities = 90/253 (35%), Positives = 141/253 (55%), Gaps = 4/253 (1%)

Query: 23  TAFASPIVTPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKR 82
           T F + +    +P  A   + +MD ++GKVLA +  D    PASLTKMMT Y+  + +  
Sbjct: 18  TFFCAILSLQASPAQAGYAHFIMDANTGKVLAARNADVLNHPASLTKMMTLYMTFEALHA 77

Query: 83  GNISLNDDVVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVA 142
           G +  +  + +SKN  A   P  SK++V  G T  V +   G+I++S ND    M +H+ 
Sbjct: 78  GRLRWDQKITMSKNG-ASVIP--SKLYVRQGQTFTVREAVYGMIVKSANDMAEGMGDHLG 134

Query: 143 GTEDAFVDLMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIY 202
           G+E  F ++M   A  LGM  + F N+ GL   +  +T  D+A LG AL RD P+EY ++
Sbjct: 135 GSEARFAEMMTRKARQLGMSKTVFRNASGLPSKSQVTTARDMARLGLALQRDFPKEYGLF 194

Query: 203 SEQKFTYNGITQYNRNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTD 262
           + + F++ G      N L++ +   +DGIKTG+T+ +G+NLVS+      R+V VV+G  
Sbjct: 195 AMESFSFRGKRIRGHNNLMY-RYQGMDGIKTGYTNASGFNLVSAINHNGRRVVGVVLGGK 253

Query: 263 NENARKAESKKLL 275
              +R A+   LL
Sbjct: 254 TARSRDAQMAALL 266