Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  113 bits (282), Expect = 2e-29
 Identities = 101/469 (21%), Positives = 207/469 (44%), Gaps = 46/469 (9%)

Query: 25  KWRILL-FSVMVTAITLLFVLSMRSEYTARATILIESTQAKAVSIEEVYGLDTKSQEYYL 83
           +WR+       V A+T+L++     EY A AT+L ++   +A         +   +    
Sbjct: 11  RWRMAAAIFCCVMALTVLWIAITPREYRATATLLFDN---RAPDPTGGKSNEATGESMLA 67

Query: 84  TQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLKERLVEWMPFLQGFKQEETVA 143
           T+  IL+S+ IA++V ERL L  +P            +++ R   W        QE+T  
Sbjct: 68  TESRILQSEVIARKVAERLGLFKNP------------AMRAR---W--------QEQTNG 104

Query: 144 DPDLEAYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKLAAKIANEIARVYMDSHL 203
           +   E +     I    + G+++SP      +++ Y + DP+ +A +AN  A+ + D+ L
Sbjct: 105 NQSFEGW-----ISRSVQSGLQVSPSATGNTIDVSYRSLDPQRSALMANSFAQAFNDARL 159

Query: 204 EAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVDVQGVEGLATQELEELTS 263
               E   +   W   ++     ++ E++A+L  F +A G+V    ++  +T+ L EL+S
Sbjct: 160 GISNEFAQRFAAWYKKQIAASEQRMEEAQARLADFQRAHGIVATGAIDAESTR-LSELSS 218

Query: 264 QMNKARDRRVAAETLYQVANSYSKNDSDLTALSSIPEISNHPTIRDLKVAEVDAERKVSE 323
           +++ A    VAAE   + A             +++P+I +   I+ L+        ++S+
Sbjct: 219 KLSSA--EAVAAEARSRAAGG-----------ANMPDIQSSGVIQGLRAQIAAKSAEISQ 265

Query: 324 FSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQAAKQSERSLQTEFNQRKS 383
            +   GP H  +++A  QL  ++ +L  E  ++   +     AA  ++ ++Q   +Q + 
Sbjct: 266 MAAELGPNHATMRAAQQQLRQMQDSLAQETGKMSGTLAAASSAASANQGTMQALLDQHRG 325

Query: 384 EFQTLTVKNAKYSELKREVQTNRELFDLFLARQKETSASGDFNTTIARFTDQASAPLTPS 443
              +L     K + L+  V++ R+ ++    +  +  A+    +      D A  P+ P+
Sbjct: 326 RMLSLAADRGKLAVLESNVESARKEYEAQTEQFSQLHATSTAPSLNIVRLDIAEPPMIPN 385

Query: 444 KPNKKLIVLLAFVVSFGFACVVAFIADAMTDTFADIKQVEKQLALSLLG 492
            PN  +  L+  +V+   A     +A+ ++        V     + LLG
Sbjct: 386 APNIGVRFLMMTMVALMLAIGSVILAEWLSPRVRSRNTVTYLTGVPLLG 434