Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., capsular exopolysaccharide family from Enterobacter asburiae PDN3

 Score =  144 bits (362), Expect = 2e-38
 Identities = 173/772 (22%), Positives = 318/772 (41%), Gaps = 109/772 (14%)

Query: 8   QEEVIDIRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAVS 67
           Q   ID+ Q F  + + +  I   +++ T    ++  S    Y A A + +E+ Q+ ++ 
Sbjct: 15  QNNEIDLLQLFAEMFDNRVTIACVTLLFTVCAGIYAFSATPVYQADALVQVEAKQSNSL- 73

Query: 68  IEEVYGLDTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLKERL- 126
           ++ +    ++       ++ +LKS  I  E +++L L  +    + P      SL E + 
Sbjct: 74  LKNLTPFGSELSPDVAPELLLLKSRMILGETVDQLGLTYNARRRVFP---VIGSLWEHVR 130

Query: 127 ----------VEWMPFLQGFKQEETVADPDLEAYRQNRLILYK--------FKRGMEI-- 166
                        +P L+G  Q   +   +   YR   + L           K G+ +  
Sbjct: 131 GRKSDEITIGALTIPLLEGKPQTLLLTVQEKGRYRLEGITLQAEGTVGKTLVKDGISLLV 190

Query: 167 ---SPIRKTQLVNIYYTAGDPKLAAKIANEIARVYMDSHLEAKL---EVELKANTWLNTR 220
              S +  TQ      T  D   A +    +      S + A     E   +  T LNT 
Sbjct: 191 TSLSAVPGTQFTLETVTRLDAINAIQNRFTVVESAKQSGMIALTLMGEDPTRIATVLNTI 250

Query: 221 MEELRTQ-LRESEAKLQAFLQAEGLVDVQGVEGLATQELEELTSQMNKARDRRVAAETLY 279
            E   +Q +   EAK      +  L  +Q      ++EL+E  +++N  R++R +     
Sbjct: 251 AENFLSQNIARQEAK-----DSRSLTFLQEQLPKISRELDEAEARLNAYREQRDSV---- 301

Query: 280 QVANSYSKNDSDLTALSSIPEISNHPTIRDLKVAEVDAERKVSEFSKRYGPKHPKLKSAS 339
                    D  L A S + ++             V+ E +++E + R            
Sbjct: 302 ---------DLSLEAKSVLDQV-------------VNVENQLNELTFR------------ 327

Query: 340 AQLEAVRKNLRAELRQLLNGINNELQAAKQSERSLQTEFNQRKSEFQTLTVKNAKYSELK 399
                      AE+ QL    +   +A ++ +++L+ E  +  +   T+     +   L 
Sbjct: 328 ----------EAEVSQLFKKDHPTYRALREKKQTLERERARLNNRVSTMPSTQQEILRLS 377

Query: 400 REVQTNRELFDLFLARQKETSASGDFNTTIARFTDQASAPLTPSKPNKKLIVLLAFVVSF 459
           R+V++ R ++   L RQ+E S S        R  D A     P KP K LI++L  ++  
Sbjct: 378 RDVESGRTIYLQLLTRQQELSISRSSTIGNVRIIDPAVVQPEPIKPRKALIIVLGMLMGL 437

Query: 460 GFACVVAFIADAMTDTFADIKQVEKQLALSLLGVVP--VVRKQRGKLDAKAYFDEKLREL 517
             +  +  +  A        +Q+E Q  + LL  +P  V   ++  L  +  F    +  
Sbjct: 438 MLSAGMVLVRSAFNRGITSSEQLEVQ-GIPLLATLPRSVWLWKKTHLRRRTLFASHWKHR 496

Query: 518 T----------------EAVRTIRTSYLLAHVNQDQHVVMLTSCLPGEGKTTSSLNLALS 561
           T                E+VR + TS     ++    +V+++      GKT  S +LA  
Sbjct: 497 TSNVPFLPVDRPADMFVESVRGLCTSLHFTMMDATNRIVVVSGPTQDCGKTLVSTSLASI 556

Query: 562 LAQM-EKTLLIDCDLRKPAIAHRFGISGSQPGVTNLLNGTQSLEDCVYHDEQSGLDILTA 620
            AQ  ++ L ID D+RK  + + F +S  + G++ +L G    ++ V   E+ G D+LT 
Sbjct: 557 AAQAGQRVLFIDADMRKGYVHNVFKLSNHR-GLSCVLGGAVEWQEAVQRVEKGGFDVLTC 615

Query: 621 GVYASNPLELLSSSKFSELLADLRTRYQRIVIDTPPCLAVSDSFMLAQYVDSVILVIDAN 680
           G    +P+ELL + +F  +++ +   Y  +++DTPP LAV+D+ ++A+   + +LV    
Sbjct: 616 GPQPLHPVELLMNERFQAVMSQIDKLYDIVIVDTPPVLAVTDALLIARAAATTLLVARFG 675

Query: 681 HTRTPVVREVVGKLTQQGSRIDGVILNRLNAKKASRY--SGYYHYQAYYGEE 730
            T    +   + +L Q G +++G ILN +  K A  Y  SGY HY   Y +E
Sbjct: 676 KTSVKEIENCLKRLQQMGVQVNGAILNDI-VKSAVLYYNSGYSHYDYGYTQE 726