Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 710 a.a., capsular biosynthesis protein from Escherichia coli ECRC62

 Score =  292 bits (748), Expect = 4e-83
 Identities = 202/708 (28%), Positives = 353/708 (49%), Gaps = 37/708 (5%)

Query: 8   QEEVIDIRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAVS 67
           +EE +D+ ++   +     +I+L  ++  A+    +  + S+Y + AT+L+++       
Sbjct: 12  REETVDVSRFAKEIKKNACKIVLAGIISGAVAYPLISMLSSKYVSTATVLLKAQADNVSP 71

Query: 68  IEEVYGLDTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLKERLV 127
             +V   D+    YY TQ  +++S  + ++ +  L L  +P+F +  ++D   S  E   
Sbjct: 72  FPQVEDFDSTRTGYYETQYALMQSRIVLEKAVRELKLDQNPDF-IGKKADEKASNSE--- 127

Query: 128 EWMPFLQGFKQEETVADPDLEAYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKLA 187
                             D E  R  R  L   ++ + +S IR T L  + Y +  P+L+
Sbjct: 128 ------------------DAEQQRIERA-LNTLQKNLTVSGIRTTNLATVSYESTSPQLS 168

Query: 188 AKIANEIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVDV 247
           ++IAN +A+ ++D  L+ K     KA      +MEE++ ++ + +A +  FL  EGL+  
Sbjct: 169 SEIANGVAQAFIDYTLDQKRLKTEKAREVNLQKMEEVQKEIAQQKADIDNFLAKEGLLTF 228

Query: 248 QGVEGLATQELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDLTALSSIPEISNHPTI 307
           +G++G  T++L  +T+++  A  RR+AAE+L +  ++  +   D   + S+P ISNH  I
Sbjct: 229 RGIDGFETEQLSIVTNRLADATQRRIAAESLEKAVSAGGRVSLD--NIISLPTISNHAQI 286

Query: 308 RDLKVAEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQAA 367
           +DL++A + A+R + E  K YGPKH K+  A AQ++A++  +   L +L  GI+ +  AA
Sbjct: 287 QDLRIAMIQAQRSLYELQKSYGPKHAKILEAQAQVKAIQDQMGVVLSELKKGIHQQYLAA 346

Query: 368 KQSERSLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDLFLARQKETSASGDFNT 427
              E+  Q + +Q+K  FQ L  K + Y+  K  +    +L+     R +E S SG  N 
Sbjct: 347 LADEKDYQAQLDQQKEIFQKLAEKRSLYNSQKLSLDKLEDLYKTLYQRTQELSLSG-INA 405

Query: 428 TIARFTDQASAPLTPSKPNKKLIVLLAFVVSFGFACVVAFIADAMTDTFADIKQVEKQLA 487
               + D A   + PSKPNK L++++   ++  F  +   +  AM ++   + QV K+L 
Sbjct: 406 DAVLY-DPAVPAVKPSKPNKALLLVMVVALAMAFFFMYVIVKAAMDNSIRTLGQVTKRLG 464

Query: 488 LSLLGVVPVVRKQRGKLDAKAYFDEKLRELTEA--VRTIRTSYLLAHVNQDQHVVMLTSC 545
           +  LG    +R+  G  D     D   R    A  + +IRT  LL   N+ Q V+ ++S 
Sbjct: 465 VVSLG---EIRRIAGAGDRAQVRDLITRNPLNADIIHSIRTQILLD--NRPQQVLAISSA 519

Query: 546 LPGEGKTTSSLNLALSLAQMEKTLLIDCD-LRKPAIAHRFGISGSQPGVTNLLNGTQSLE 604
             GEG++  +  LA S +  +KTLL+D D   +  ++  F  S S  GV  LL G  +L 
Sbjct: 520 KQGEGRSLLASLLANSFSFDQKTLLLDLDFFNRDGLSAEFSTSTS-AGVAELLRGEVTL- 577

Query: 605 DCVYHDEQSGLDILTAGVYASNPLELLSSSKFSELLADLRTRYQRIVIDTPPCLAVSDSF 664
           D         LD L  G   ++ L +LSS +F  L+ DLR RYQRI++D        D  
Sbjct: 578 DAARITLSDTLDFLPRGKANASSLLMLSSERFEPLIRDLRNRYQRIIVDVSAVSQSQDIE 637

Query: 665 MLAQYVDSVILVIDANHTRTPVVREVVGKLTQQGSRIDGVILNRLNAK 712
           ++++ VD V+ V+ A       +R  + K+      + G +LN +  K
Sbjct: 638 LISRVVDGVVFVVQAGAASVETLRAALAKVDANQEVVMGAVLNLVEEK 685