Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 810 a.a., capsular exopolysaccharide family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  144 bits (363), Expect = 2e-38
 Identities = 126/577 (21%), Positives = 248/577 (42%), Gaps = 27/577 (4%)

Query: 159 KFKRGMEISPIRK-TQLVNIYYTAGDPKLAAKIANEIARVYMDSHLEAKLEVELKANTWL 217
           K+++ + ++P  K   ++ I     + KL     N + RVY++  L  K +      +++
Sbjct: 232 KYQKAISVAPTNKLASILQISMETPNRKLGQDFINRLMRVYLERELSEKNKATANTISFI 291

Query: 218 NTRMEELRTQLRESEAKLQAFLQAEGLVDVQGVEGLATQELEELTSQMNKARDRRVAAET 277
           + ++  +   L   E +LQ +     + ++     +  + L++   Q ++   +      
Sbjct: 292 DDQLNGITDSLSYFETRLQDYRTKNHVFNLSEEGVMIFERLQDYEKQRSEIELKL----D 347

Query: 278 LYQVANSYSKNDSDLTALSSIPEISNHPTIRDL--KVAEVDAERKVSEFSKRYGPKHPKL 335
            Y    SY + +SD   ++     +  P +  L  K++E+  ER        Y    P L
Sbjct: 348 YYHTLESYLQGESDEGLVAPSIIGNTDPLLNSLVVKLSELQTERL--RLKSTYSSSTPAL 405

Query: 336 KSASAQLEAVRKNLRAELRQLLNGINNELQAAKQSERSLQ---TEFNQRKSEFQTLTVKN 392
           +  + Q++  R+++          + N   A K +E +L       NQ + E   L    
Sbjct: 406 EQINTQIKTTRQSV----------LENTKSAIKNTESALAEIANRINQVEQEINKLPETE 455

Query: 393 AKYSELKREVQTNRELFDLFLARQKETSASGDFNTTIARFTDQASAPLTPSKPNKKLIVL 452
                ++R+   N  ++   L ++ E+      NT      D A A   P  P   + ++
Sbjct: 456 RNLLGIQRKFSINENIYLYLLQKRAESQIVLASNTPKHSILDTARAATKPVAPKTLINLV 515

Query: 453 LAFVVSFGFACVVAFIADAMTDTFADIKQVEKQLALSLLGVVPVVRKQRGKLDAKAYFDE 512
           L   V   F     F+ +   +   D K++E+Q+ + L+G++   +      +     + 
Sbjct: 516 LGAFVGLFFPVGFIFVRNFFNNKIEDPKELEEQIPVPLIGMIG--KNPASHENVLTVLNR 573

Query: 513 KLRELTEAVRTIRTSYLLAHVNQDQHVVMLTSCLPGEGKTTSSLNLALSLAQM-EKTLLI 571
               ++E  R++R           +  ++ TS + GEGKT  ++NLA   A M +KT+LI
Sbjct: 574 PKSTISENFRSLRADMTFLSPGAKKLTILFTSSVSGEGKTFCAVNLASVYAMMGKKTILI 633

Query: 572 DCDLRKPAIAHRFGISGSQPGVTNLLNGTQSLEDCVYHDEQSGLDILTAGVYASNPLELL 631
             DLRKP IA  FG+   + GV+  L+     ++ V       LD+L +G    NP ELL
Sbjct: 634 GLDLRKPKIAEEFGMINDR-GVSTCLSVGMPWKEAVKPSGYDQLDVLLSGPVPPNPAELL 692

Query: 632 SSSKFSELLADLRTRYQRIVIDTPPCLAVSDSFMLAQYVDSVILVIDANHTRTPVVREVV 691
           + + F+E++ D++  Y  +++D  P   VS++  L    D  + V   N++    ++ + 
Sbjct: 693 AQNYFTEMIEDIKAHYDVLILDCAPVGLVSETKELFSLADINMYVFRQNYSPKANLQILR 752

Query: 692 GKLTQQGSRIDGVILNRLNAKKASRYSGYYHYQAYYG 728
           G + + G +    +LN ++  +   Y   Y Y   YG
Sbjct: 753 GLVEKGGVKKMYSLLNDVDF-EMGHYGFAYGYGYGYG 788