Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 813 a.a., capsular exopolysaccharide family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  133 bits (334), Expect = 4e-35
 Identities = 127/564 (22%), Positives = 258/564 (45%), Gaps = 52/564 (9%)

Query: 192 NEIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVDVQGVE 251
           N +   YM+  LE K ++      ++  +M  +   L+ +E ++  F     ++DV    
Sbjct: 259 NALMNAYMEHDLEKKNQIAENTLKFIEEQMYVVEDSLKLAERRMLNFKVDHKMLDVDSEY 318

Query: 252 GLATQELEELTSQMNKARDRRVAAETLYQVANSY-SKNDSDLT-----ALSSIPEISNHP 305
           G    +++ L  ++ +     V     Y+   +Y ++ D D +     ++  I + S + 
Sbjct: 319 GGVLTKIQRLEEKLQEM----VFELEYYKSLEAYLAERDGDFSETIAPSMMGITDASLNS 374

Query: 306 TIRDLKVAEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQ 365
             + L    ++ +R +S  ++     HP ++    Q+  +R+N+   ++ L   + N  +
Sbjct: 375 MTQQLMTFSMERKRMLSVVNEN----HPDVEKLDEQIARLRENIFENIKNL---VANTEK 427

Query: 366 AAKQSERSLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDLFLARQKETSASGDF 425
             +++E+ L T       EF  L    + ++ + RE +    L++  L ++ E   +   
Sbjct: 428 KKQEAEKKLATY----DREFSRLPKAESNFANIFREFKLRENLYNYLLEKRAEVGIAKAS 483

Query: 426 NTTIARFTDQAS--APLTPSKPNKKLIVL-LAFVVSFGFACVVAFIADAMTDTFADIKQV 482
           N +     D A   + + P K N   + L +  ++  G      F+ D + D      Q+
Sbjct: 484 NVSDISVVDYAKKGSLIFPKKANNYGMALAIGLLLPLGLILFYDFVNDKIVDQV----QL 539

Query: 483 EKQLALSLLGVVPVVRKQRGKLDAKAYFDEKLRELTEAVRTIRTSYLLAHVNQDQHVVML 542
           +  L + LLG +    K+   L A+  + + +   +E+ R++R++      ++    +++
Sbjct: 540 KGALRMPLLGTIGYSEKKTNMLVAE--YPKTIA--SESFRSLRSALFYIASDKKCKRILV 595

Query: 543 TSCLPGEGKTTSSLNLALSLAQM-EKTLLIDCDLRKPAIAHRFGISGSQPGVTNLLNGTQ 601
           TS + GEGKT  SLNLA ++A   +KT ++  DLRKP IA   G+S ++ G+++ L G  
Sbjct: 596 TSSVSGEGKTFVSLNLAAAMALSGKKTCVLGMDLRKPRIAQYVGVS-NKSGLSSYLVGKS 654

Query: 602 SLEDCVYHDEQSGLDILTAGVYASNPLELLSSSKFSELLADLRTRYQRIVIDTPPCLAVS 661
           S E  ++  +   L  + +G    NP ELL   + SEL+  L   ++ I++DTPP   VS
Sbjct: 655 SKEAIIHETDHDNLYFIPSGPVPPNPSELLLKPQLSELMNVLEKEFEVIILDTPPLALVS 714

Query: 662 DSFMLAQYVDSVILVIDANHTRTPVVREVVGKLTQQGSRIDGVILNRLNAKKA--SRYSG 719
           ++  L ++ D  + ++  ++T+   +  ++  L   G ++D       NA KA  + + G
Sbjct: 715 ETKDLLRFSDVNLYIVRQDYTQKKYLL-MINDLFDNG-QVDN-FYGVFNAVKADGNDFGG 771

Query: 720 YY-------------HYQAYYGEE 730
           Y              HY  YY ++
Sbjct: 772 YNYGYGYNYSFIKKGHYSGYYDDD 795