Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 734 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  302 bits (773), Expect = 5e-86
 Identities = 193/726 (26%), Positives = 372/726 (51%), Gaps = 22/726 (3%)

Query: 14  IRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAVSIEEVYG 73
           +R+   +L  +K  I    V+ T +  L    M   YTA   I++E  +   ++ E V  
Sbjct: 17  VRRTTGLLRRHKLLIGTVIVVGTGLAALVAFRMTPLYTAETLIMVEHRKNTVLNFEGVVS 76

Query: 74  LDTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFDLS---PESDASPSLKERLVEWM 130
             T       +++ ILKS   A++V+ +L L +DPEF+ S   P      +L  R   W+
Sbjct: 77  DMTPDISALQSEVAILKSPAFAEKVVAKLKLMNDPEFNASLRPPPPGWVSALNPR--NWI 134

Query: 131 PFLQGFKQEETVADPDLEAYRQNRL--ILYKFKRGMEISPIRKTQLVNIYYTAGDPKLAA 188
           P          ++  ++E   +N L  ++        + P  ++ ++ + + + DP+ ++
Sbjct: 135 PDSWKASSGVPLSPEEIE---RNHLTSVVNAVLDNTSVRPQGRSYVIAVSFDSEDPRKSS 191

Query: 189 KIANEIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVDVQ 248
            IAN +A +Y+   L+ K +   +A  WL  R+ +LR + + +   ++ +    GL    
Sbjct: 192 LIANTMADLYLVDQLDEKFKASKRATQWLEERLTDLRREAQTTGDAVEKYRTQHGLTTSS 251

Query: 249 GVEGLAT-QELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDLTALSSIPEISNHPTI 307
             E     Q+L +L +    AR +R  AET  +   + + +       S++ ++   P I
Sbjct: 252 NNESTVVGQQLSQLNADYILARTKRQEAETKLRDVTAMANSPR---GASAVGDVMGSPLI 308

Query: 308 RDLKVAEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQAA 367
           + L+  EVD +R++++ + RYG KHP L++  +QL  ++  ++ ++ ++++ ++NE++ A
Sbjct: 309 QALREREVDLQRQIADATNRYGAKHPMLQALQSQLRDLQGQIKTDVGKIVSNLSNEVELA 368

Query: 368 KQSERSLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDLFLARQKETSASGDFNT 427
           K  E+ L+   +Q +++             L+R+  T + +++  L R ++ +   D   
Sbjct: 369 KGREQGLKASLDQAEAKQNEQQQATVGLRTLERDAGTAQSMYEALLTRSQQIATQNDMRQ 428

Query: 428 TIARFTDQASAPLTPSKPNKKLIVLLAFVVSFGFACVVAFIADAMTDTFADIKQVEKQLA 487
             AR   +AS PL PS+PN+KLI+LLA V S     ++A + +     F    Q E    
Sbjct: 429 PDARIVSEASIPLDPSQPNRKLILLLALVASGTLGVLLAMLRERAESGFRSPHQFETATG 488

Query: 488 LSLLGVVPVVRKQRGKLDAKAYFDEKLRELTEAVRTIRTSYLLAHVNQDQHVVMLTSCLP 547
           +  LG+VP + +  G   A    D+ +    E+++ +RTS LLA+ +    V++ +S +P
Sbjct: 489 VRSLGIVPRIPRFGGS-PAAYVVDKPISAFAESMQNLRTSLLLANPDGRHRVILFSSSVP 547

Query: 548 GEGKTTSSLNLALSLAQM-EKTLLIDCDLRKPAIAHRFGISGSQPGVTNLLNGTQSLEDC 606
           GEGK++ +   A + A   ++T+L+DCDLR+  +    G+S ++ G+  +L GT +LE+ 
Sbjct: 548 GEGKSSVAAAFARTCANAGQRTILVDCDLRRKCLHEMLGMSNNR-GLAEVLAGTATLEEV 606

Query: 607 VYHDEQSGLDILTAGVYASNPLELLSSSKFSELLADLRTRYQRIVIDTPPCLAVSDSFML 666
           +  D ++GL ++ AG   + P + L SS   +LL+ L   Y RIV+D+PP LAVS+  +L
Sbjct: 607 IQVDPRTGLHVIPAGHGRTLPQDTLGSSGMHQLLSRLSVNYDRIVLDSPPVLAVSEGKLL 666

Query: 667 AQYVDSVILVIDANHTRTPVVREVVGKLTQQGSRIDGVILNRLNAKKASRY----SGYYH 722
           A   D  + ++    T+       + ++ + G  + GV+ ++++ ++ ++Y    SG YH
Sbjct: 667 AALADQTVFIVRWGMTKRGTAMAGLKEVIEAGGEVVGVLFSQVDTRRHAQYEFPDSGRYH 726

Query: 723 -YQAYY 727
            Y+ YY
Sbjct: 727 GYRRYY 732