Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 755 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  267 bits (683), Expect = 1e-75
 Identities = 194/729 (26%), Positives = 352/729 (48%), Gaps = 22/729 (3%)

Query: 12  IDIRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAVSIEEV 71
           +D +Q    L   ++ ILL + +      L V  ++  YTA A ++I+S + + V I+E+
Sbjct: 31  LDFKQTLITLWRRRYYILLLTAIAAGGAWLLVSRIQPVYTATAEVMIDSRRTRIVDIKEI 90

Query: 72  YGLDTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFD--LSPESDAS---PSLKERL 126
               +       +++E+L+S T+A  V + L+L  DPEF+  L PE  +     SL+   
Sbjct: 91  LSQLSPQLVTVSSEVEVLQSRTLATRVADALNLYDDPEFNPALRPEQPSLFDFSSLRSVA 150

Query: 127 VEWMPFLQGFKQEETVADPDLEAYRQNRL-ILYKFKRGMEISPIRKTQLVNIYYTAGDPK 185
            +    L   +    +     EA    R  ++ + + G+ ++ + ++ ++ I Y + +P 
Sbjct: 151 TQLRDVLS-LESPTPIGPTPAEAEASKRAEVIDRLRSGLGVAAVPQSMVIRISYRSPNPA 209

Query: 186 LAAKIANEIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLV 245
            A++IAN  A  Y+   LEAK +    A  WLN R+E LR  L  SE  + A+     L+
Sbjct: 210 AASRIANAFAEHYITEQLEAKFQAVRYATNWLNERLEGLRRDLAASEQAISAYRATHNLL 269

Query: 246 DVQGVEGLATQELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDLTALSSIPEISNHP 305
           +  G      Q+L E  S++ + + +R  AE   ++A   +   +    +++  E+ +  
Sbjct: 270 ESHGAS-TTQQKLTEQNSRLVETQSKR--AEVAARIARLEAVGRAG-RGMAASDELLDSS 325

Query: 306 TIRDLKVAEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQ 365
            +  LK  E     + S+ + RYG +HP++    A+L  +R  +  E+ +L  G+ +EL 
Sbjct: 326 FLSRLKEQEATLSGQASDLASRYGERHPQIAKIRAELGEIRGKISTEIARLTQGLRSELA 385

Query: 366 AAKQSERSLQTEFNQRKSEFQTLTVKNAKYS--ELKREVQTNRELFDLFLARQKETSASG 423
             +  E+S+  E   R+ E ++ +  NA+    EL+RE Q NR L++ FL R KET    
Sbjct: 386 VLQDREQSMSREI--REMESRSFSQNNAEIGLRELEREAQANRILYETFLNRFKETDQQE 443

Query: 424 DFNTTIARFTDQASAPLTPSKPNKKLIVLLAFVVSFGFACVVAFIADAMTDTFADIKQVE 483
                 AR    +  P +P+ P K +++L A +     A  +  + +   +T     Q+E
Sbjct: 444 TIQQPDARIISFSERPRSPTSPKKFMLILAATLGGMMSALALVLLVEKFDNTIRTKDQLE 503

Query: 484 KQLALSLLGVVPVVRKQRGKLDAKAYFDEK-LRELTEAVRTIRTSYLLAHVNQDQHVVML 542
           +   L  LG+VP +    G  +  AY  E+      EA R    +        +   +++
Sbjct: 504 QLTGLPALGLVPQISGPAG--NVAAYLVERPASSYAEAFRIACFAIRHPPDRPEPKTLVI 561

Query: 543 TSCLPGEGKTTSSLNLALSLAQME-KTLLIDCDLRKPAIAHRFGISGSQPGVTNLLNGTQ 601
           TS +P EGK+ +SL++  + + +  + LL+D D+R+ +I+ + G   S   +  +L    
Sbjct: 562 TSTVPDEGKSLTSLSIGRTASMLGLRVLLVDADMRRASISAKVG-KASDLSLAEVLTEGL 620

Query: 602 SLEDCVYHDEQSGLDILTAGVYASNPLELLS-SSKFSELLADLRTRYQRIVIDTPPCLAV 660
                V  D  +GLDILTA      P+++L+ + K  + +  +R  Y  ++ D PP L+V
Sbjct: 621 DFHSAVIRDPLTGLDILTATAAGRKPVDMLAMADKVHQTMLAMRDAYDLVIFDCPPVLSV 680

Query: 661 SDSFMLAQYVDSVILVIDANHTRTPVVREVVGKLTQQGSRIDGVILNRLNAKKASRYSGY 720
           +D  +LA++ D+ +  +  N T    V   V  L    + + GV+L R+N +K + Y GY
Sbjct: 681 ADVQVLARHADATLFCLRWNATPRESVLAAVRMLKDAKANVAGVLLTRVNVRKHASY-GY 739

Query: 721 YHYQAYYGE 729
                YYG+
Sbjct: 740 RDMGYYYGK 748