Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 772 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  249 bits (636), Expect = 4e-70
 Identities = 208/767 (27%), Positives = 356/767 (46%), Gaps = 68/767 (8%)

Query: 7   TQEEVIDIRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAV 66
           T  + +D+ +   +L   KW IL  + ++    +L + +M   Y++   ++I+    + +
Sbjct: 26  TGADKVDVSRLVQMLWRQKWLILGLTAVLWLPAVLLINAMTPLYSSSTVVVIDPHPNRVI 85

Query: 67  SIEEVYGLDTKSQEYYL----TQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSL 122
           +I  V    ++    YL    T++EIL+S  +A  V+E L+L  +PE+       A+P+ 
Sbjct: 86  NIPSV----SEPMGIYLDTVNTEVEILRSRDLAARVVEALNLGQEPEY-------AAPTN 134

Query: 123 KERLVEWMPFLQGFKQ---EETVADPDLEAY-----------------RQNRLILYKFKR 162
           K  L  + P ++  +    E T   PD  A                  R+   +   F++
Sbjct: 135 KPGL--FSPLMEEGRTLLTEVTAMLPDSLAVLLTPPPRPAAPTGNAQDREADRLTEAFQK 192

Query: 163 GMEISPIRKTQLVNIYYTAGDPKLAAKIANEIARVYMDSHLEAKLEVELKANTWLNTRME 222
            + ISP  +++ + I   A DP+LAA+ A  +A  Y+   +EAK +    A+ WL +R++
Sbjct: 193 NLRISPGVQSRAIRITVEAKDPQLAARAATAVADAYLAIQVEAKRKATQNASEWLQSRLD 252

Query: 223 ELRTQLRES-EAKLQAFLQAEGLVDVQGVEGLATQELEELTSQMNKARDRRVAAET-LYQ 280
           ELR  +  +  A ++A     G+V  +    L  +E+  L  Q+ +AR     A+  L Q
Sbjct: 253 ELRQDMTTTGRAAVEAMRSETGMVKGRDAP-LVNEEMSALNGQLAEARTAHANAQARLRQ 311

Query: 281 VANSYSKNDSDLTALSSIPEISNHPTIRDLKVAEVDAERKVSEFSKRYGPKHPKLKSASA 340
           + +    N   LT      +I   P I  L+  +     +++E   +YG +HP L   +A
Sbjct: 312 LQSVRPGNPESLTGA----DIGGDPLITTLRQRQAALNAQLAELRAQYGDRHPALNRPTA 367

Query: 341 QLEAVRKNLRAELRQLLNGINNEL--QAAKQSERSLQTEFNQRKSEFQTLTVKNAKYSEL 398
           +L  +   L  E+ +++  +  E+  Q AK  + S + E   R   F TL   + +  +L
Sbjct: 368 ELRELNATLATEVDRVVRSLRGEVEQQVAKIQDLSRRLE-GLRTESFDTLQA-DVRLRDL 425

Query: 399 KREVQTNRELFDLFLARQKETSASGDFNTTI-ARFTDQASAPLTPSKPNKKLIVLLAFVV 457
           +R+   + + +   + R KET        T   R    A+ P  P  P K ++  LA VV
Sbjct: 426 QRQADASDDNYRRAVTRLKETQVLQALEMTPDVRIVSAAAVPGGPVGPGKAVLAGLAAVV 485

Query: 458 SFGFACVVAFIADAMTDTFADIKQVEKQLALSLLGVVPVV--RKQRGKLDAKAY------ 509
               A  VA +            QVE  L L  +G+VP++   K+  + D   Y      
Sbjct: 486 CGAIATGVALVRTMRQRGVYSSHQVEALLGLPAVGIVPLLGRAKRSARADDDPYSNTGGG 545

Query: 510 -FDEKLRELTEAVRTIRTSYLLAHVNQDQHVVMLTSCLPGEGKTTSSLNLALSLAQM-EK 567
            F E +  L   +  +RT    A V   + VVMLTS + GEGKTT ++ L+  LA    +
Sbjct: 546 DFAEAVWRLCARLHLVRTGAEPASVKGGE-VVMLTSSVSGEGKTTLAVALSAFLADTGRR 604

Query: 568 TLLIDCDLRKPAIAHRFGISGSQPGVTNLLNGTQSLEDCVYHDEQSGLDILTAGVYASNP 627
            +++DCD R+PA+    G      G+T+LL G  +L+  ++ D++  + ++ AG     P
Sbjct: 605 VVIVDCDTRRPAVHRLLGGVRPPKGLTDLLEGDATLDQVLHIDDRRRVSVIAAGRPVDRP 664

Query: 628 LELLSSSKFSELLADLRTRYQRIVIDTPPCLAVSDSFMLAQYVDSVILVIDANHTRTPVV 687
             LL S     LL +L  RY  +V+DTPP L+VSD+ +LA   D V+ V+    T + + 
Sbjct: 665 QILLGSKAMLSLLVELAERYDVVVLDTPPVLSVSDALILAPLADRVLYVVRWARTASSLA 724

Query: 688 REVVGKLTQQGSRIDGVILNRLNAKKASRYSGYYHYQAYYGEETKSG 734
              + ++ Q G RI G +L+ +NA++        H    YG    SG
Sbjct: 725 SAGIKQVRQVGGRIGGAVLSMVNARE--------HANLEYGARPPSG 763