Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 780 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  253 bits (647), Expect = 2e-71
 Identities = 196/752 (26%), Positives = 349/752 (46%), Gaps = 51/752 (6%)

Query: 13  DIRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAVSIEE-V 71
           D R    VL  +K  I+L  + +TA++   V  M+ +YT+ A +L+++ Q + V  E+  
Sbjct: 42  DFRFILRVLAAHKTLIILIVLALTALSAFAVSLMKDKYTSEALLLVDNRQVRVVRAEDQA 101

Query: 72  YGLDTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLKERLVEWM- 130
               T      L++IEILKS  +  + +  L LA++ E++   ++D +    ER   W  
Sbjct: 102 LNSITPEDGAILSEIEILKSTAVLSQAVTDLKLATNQEYNPPVQADETKPFVERATAWTR 161

Query: 131 --------PFLQGFKQ------EETVADPDLEAYRQNRLI---LYKFKRGMEISPIRKTQ 173
                   P L G  Q      +    D  L   R    I   L + +R +E+  + +++
Sbjct: 162 EQAHAVFGPELPGVVQAVLAHGDNMTKDTHLRETRAADSIDGVLDRVRRNLEVGVVGRSR 221

Query: 174 LVNIYYTAGDPKLAAKIANEIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEA 233
           ++ + YTAGDP++A K+ + + R YM++  +   ++   A  WL  R+  LR ++  ++ 
Sbjct: 222 VIQVRYTAGDPEIAQKVVDTVVRRYMETRQQMDRDLSTSAVAWLEDRIATLRKEVAAADT 281

Query: 234 KLQAFLQAEGLVDVQGVEGL-ATQELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDL 292
           K+ A     GLV   G  GL AT ELE+   ++ +A   R  A    Q     + N   L
Sbjct: 282 KVDAVRFKAGLVK-NGANGLMATTELEQARLRLAEAAATRARAVAQAQTLERSAGNGGSL 340

Query: 293 TALSSIPEISNHPTIRDLKVAEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAE 352
            +          P +  L+        ++++ S++YGPKHP+++   A+L     +L+ E
Sbjct: 341 AS----------PVVAQLRATVASISTELAQLSRQYGPKHPRIQELQARLNEANSSLQQE 390

Query: 353 LRQLLNGINNELQAAKQSERSLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDLF 412
           +R  + G+      A + E +L+    + +S +QT+T +      L+ E Q  R+L D  
Sbjct: 391 VRHEIGGVREAANVAIEQENALKGMIAKLESGYQTMTEEAVPLRTLEAEAQAKRQLLDSL 450

Query: 413 LARQKETSASGDFNT--TIARFTDQASAPLTPSKPNKKLIVLLAFVVSFGFACVVAFIAD 470
           L R +E  A  D     T  +       P  PS P + L++L  FV S   A  + F  +
Sbjct: 451 LGRLEEVQAQQDNRAFPTAVKLVSAPQVPHEPSGPFRILMLLAGFVASLAVAIFIVFGIE 510

Query: 471 AMTDTFADIKQVEKQLALSLLGVVP--VVRKQRGKLDAKAYFDEKLRELTEAVRTIRTSY 528
                      V + L +  + +VP    R  RG+LD + + +      +E++R +  ++
Sbjct: 511 LFQRRIRTPDAVRRILGVGTVHIVPHHSTRGTRGRLD-QIFQNHPFSLFSESMRALFRNH 569

Query: 529 L--LAHVNQDQHVVMLTSCLPGEGKTTSSLNLALSLAQM-EKTLLIDCDLRKPAIAHRFG 585
           L  L  V      + +TS  P +GKT+ SL +A   AQ   + +++D D R+  I   F 
Sbjct: 570 LSDLGPVGS----IAVTSARPQDGKTSMSLAVAQVAAQAGRRVVVVDTDFRRSRIDGLFN 625

Query: 586 ISGSQPGVTNLLNGTQSLEDCVYHDEQSGLDILTAGVYASNPLELLSSSKFSELLADLRT 645
           +S ++ G+++ ++GT +L++ V+  E +   ++ AG   S  L+  +      L+A L  
Sbjct: 626 LS-AKKGLSDWISGTATLDEIVHTSEDAPYAMIPAGRLMSETLDRFNVDGLIHLMAGLSP 684

Query: 646 RYQRIVIDTPPCLAVSDSFMLAQYVDSVILVIDANHTRTPVVREVVGKLTQQGSRIDGVI 705
            +  +V DT P LAVSD+ ++      V+ V    HT    ++ V        S+   V+
Sbjct: 685 HFDLVVFDTAPALAVSDARIVCGAASKVLFVSRWGHTTASDLQAVADLGPIDHSKFVAVM 744

Query: 706 LNRLNAKKASR------YSGYYHYQAYYGEET 731
            + +N KKA+       Y+ Y   + YYG+ T
Sbjct: 745 TD-VNLKKAASRGYQGPYNSYVATRKYYGDTT 775