Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., polysaccharide biosynthesis protein from Agrobacterium fabrum C58

 Score =  214 bits (545), Expect = 1e-59
 Identities = 171/697 (24%), Positives = 308/697 (44%), Gaps = 36/697 (5%)

Query: 14  IRQYFNVLLNYKWRILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAVSIEEVYG 73
           I ++ ++L   +  + +  +   AI  +        Y A AT+ ++  + +A+  E V  
Sbjct: 14  ISRFISILRERRRAVFICFLASFAIAAIGYARTPIRYKAEATLALDVRKLQALPTESVVS 73

Query: 74  LDTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLKERLVEWMPFL 133
              +      T+++I+ S ++A+ V+  L                    K+RL+E     
Sbjct: 74  PLPQESPVLRTELDIIGSRSMAERVLVILQ-------------------KDRLLEGRQTN 114

Query: 134 QGFKQEE-TVADPDLEAYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKLAAKIAN 192
                 + T    D E  ++    +      + +    ++  + I Y AGDP LAAK+AN
Sbjct: 115 SDRATNDVTTLGNDAETSKK----VDNLMTNVRVMNDGRSYTIYISYYAGDPALAAKVAN 170

Query: 193 EIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVDVQGVEG 252
                Y+D  ++ +     + + WL  R+  LRT L ESE +   F +  GL++  G+  
Sbjct: 171 AFGEAYIDYQIDLQTTATRRVSAWLGERLVSLRTALEESERQASQFREKSGLINTGGLP- 229

Query: 253 LATQELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDLTALSSIPEISNHPTIRDLKV 312
           L +Q L  L  ++   + +   +      A +  K+   L     I E+ + PTI+ L+ 
Sbjct: 230 LQSQRLSSLNVELTTLQAKLAGSRARLATALALQKSGDGL----GITEVLSSPTIQLLRA 285

Query: 313 AEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQAAKQSER 372
            +    R +++  +      P+    S+QL ++ K + +E+ Q++  + NE++  ++  +
Sbjct: 286 EQARVIRAIAQIDESGAVMSPERPQLSSQLSSLNKQIDSEIAQIIAALRNEIEVNEKQRQ 345

Query: 373 SLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDLFLARQKETSASGDFNTTIARF 432
            ++   N  +    T  +   +  +L RE   NR +++ +LAR K+T       T  AR 
Sbjct: 346 EVEASLNDVQRAISTTDMAMVQSGQLDREAAANRSIYETYLARYKQTIEQDGIATAEARI 405

Query: 433 TDQASAPLTPSKPNKKLIVLLAFVVSFGFACVVAFIADAMTDTFADIKQVEKQLALSLLG 492
              A     P+ P+  L  L+A ++        AFI +    +   I  ++++  L+++G
Sbjct: 406 ISSAMPSRKPTSPDAGLWGLVALLLGCSTGLATAFILNFTDRSVGSITSLQQKTGLNVIG 465

Query: 493 VVPVVRKQRGKLDAK-AYFDEKLRELTEAVRTIRTSYLLAHVNQDQHVVMLTSCLPGEGK 551
            +P  R   G+   K   F     +   A   ++T   LA       V+  TS   GEGK
Sbjct: 466 RIP--RISFGEFQNKPGKFSSGAADFYSAFADLQTHLQLA--ESKAKVIAFTSSADGEGK 521

Query: 552 TTSSLNLALSLAQM-EKTLLIDCDLRKPAIAHRFGISGSQPGVTNLLNGTQSLEDCVYHD 610
           T    NLA SLA    K LLID +LR PA+   F + GS   V   ++   +L+D +  D
Sbjct: 522 TFVIANLARSLAMSGVKLLLIDANLRNPALGAEFDV-GSTSHVAQAVSHEVTLDDIIQRD 580

Query: 611 EQSGLDILTAGVYASNPLELLSSSKFSELLADLRTRYQRIVIDTPPCLAVSDSFMLAQYV 670
           + SG+DI+ A      P  +L S +F+ L+ + R RY+ I+I+ P      D   +A   
Sbjct: 581 QASGVDIIIAEKSDMPPNLVLGSKRFAGLIVEARQRYELILIEAPSVDHDLDLLRIATLS 640

Query: 671 DSVILVIDANHTRTPVVREVVGKLTQQGSRIDGVILN 707
           D+V  V+  +      ++  V KL   G  I G+ILN
Sbjct: 641 DAVSFVVRQDVADGTGMKNAVIKLRVAGRPITGIILN 677