Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 797 a.a., exopolysaccharide polymerization/transport protein from Agrobacterium fabrum C58

 Score =  182 bits (463), Expect = 4e-50
 Identities = 166/742 (22%), Positives = 323/742 (43%), Gaps = 57/742 (7%)

Query: 34  MVTAITL--LFVLSMRSEYTARATILIESTQAKAVSIEEVYGLDTKSQEYYLTQIEILKS 91
           ++ A+ L  L+++     YTA   +L++ + ++    E              + +EILKS
Sbjct: 58  VIAAVVLAGLYLVLATPVYTAMTQVLLDESLSRYAEEESPVPAAQIVDNRIASAVEILKS 117

Query: 92  DTIAQEVIERLDLASDPEF---DLSPESDASPSLKERLVEWMPFLQGFKQEETVADPDLE 148
             +A  V+++  L  +       +SP      S++  L   +P       +  V++  + 
Sbjct: 118 KEMALTVVDKAKLDENDTIVNPPMSPVELVKSSVRGILDLVLP------GDPPVSEAAIR 171

Query: 149 AYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKLAAKIANEIARVYMDSHLEAKLE 208
           A R+ +      ++ + +  + ++ ++ I   + D +LAA+IA   A+ Y+   L A  +
Sbjct: 172 AGRREKAAAM-LQQSLAVERVGRSSVIAISTRSTDRQLAAQIAKTYAQAYLTEQLNANFD 230

Query: 209 VELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVDVQGVEGLATQELEELTSQMNKA 268
              +A+ WL  RM +L  + + +E  +Q F     +V  +G E ++  +L +L  Q+  A
Sbjct: 231 ASERASVWLQERMTDLNQRAQAAELAVQKFRSDNNIVSSRG-ELMSESQLADLNGQLIAA 289

Query: 269 RDRRVAAETLYQVANSYSKNDSDLTALSSIPEI--SNHPTIRDLKVAEVDAERKVSEFSK 326
           +     A   Y    S      +    +++     +++  I+DL+   +    +     +
Sbjct: 290 QADAATASARYSQYKSIIDRGPETAVDNAVVSARDTDNSVIQDLRKRYITISDRQRGIVQ 349

Query: 327 RYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQAAKQSERSLQTEFNQRKSEFQ 386
           ++G  HP+  +  A+ + + + +  EL+QL     NE   A    +SL+   ++      
Sbjct: 350 QFGADHPQATALDAEKKELSQQIFQELQQLTGSFKNEFDVANSRVQSLRDNIDKVAGRNS 409

Query: 387 TLTVKNAKYSELKREVQTNRELFDLFLARQKETSASGDFNTTIARFTDQASAPLTPSKPN 446
              +   +  EL++     R L+  +L R +E S         AR   +A  P +PS P 
Sbjct: 410 EANITMVQLRELEQRATALRTLYQSYLGRFEEASQKQSLPIAKARIISEAGLPTSPSSPK 469

Query: 447 KKLIVLLAFVVSFGFACVVAFIADAMTDTFADIKQVEKQLALSLLGVVPVVRKQRGKLDA 506
           K + + L+ ++       +A + +     F     V   L +  LG +P +  +RG  +A
Sbjct: 470 KTMTMALSVILGLMLGGGIAALLEFRDRFFHTGNDVRDNLRMRFLGYLPFI-GERGVENA 528

Query: 507 KA--------------------YFDEKLRELTEAVR-----TIRTSYLLAHV---NQDQH 538
           KA                     F + LR   ++ R     T+R   L A V    +   
Sbjct: 529 KAGTSAATPGGENATLDESGQVSFQKMLRLAVDSPRSSFAETLRNVKLTADVVIQERQCR 588

Query: 539 VVMLTSCLPGEGKTTSSLNLALSLAQM-EKTLLIDCDLRKPAIAHRFGISGSQPGVTNLL 597
           V+ + SCLP EGK+  +LNLA  +A   ++TL++D D+R P ++ R   +    G+  ++
Sbjct: 589 VIGVISCLPNEGKSVVALNLAGLIASTGKRTLVVDADIRNPGLS-RMLTTRQSAGLVEVV 647

Query: 598 NGTQSLEDCVYHDEQSGLDIL---TAGVYASNPLELLSSSKFSELLADLRTRYQRIVIDT 654
                    V  D ++ + IL   T+  +A +  ELLSSS   + +   R     I++D 
Sbjct: 648 LDEVPWTQAVKVDTRTKMGILPVSTSNQFAHSS-ELLSSSGMRKFIDSAREACDYIIVDL 706

Query: 655 PPCLAVSDSFMLAQYVDSVILVIDANHTRTPVVREVVGKLTQQGSRIDGVILNRLNAKKA 714
            P + V D+   A  VD  + V +   T   +V+ ++    Q  ++  G++LN+ +  + 
Sbjct: 707 APVVPVIDAKAFAPQVDGFVFVTEWGKTPIQMVQNLMANEPQIANKTLGIVLNKTDMTEL 766

Query: 715 SRYSG-----YYH--YQAYYGE 729
            RY+G     +YH  + AYYG+
Sbjct: 767 QRYAGPGGSEHYHEKFSAYYGD 788