Pairwise Alignments

Query, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

Subject, 749 a.a., exopolysaccharide polymerization/transport protein from Agrobacterium fabrum C58

 Score =  242 bits (617), Expect = 6e-68
 Identities = 199/746 (26%), Positives = 338/746 (45%), Gaps = 38/746 (5%)

Query: 10  EVIDIRQYFNVLLNYKWRILLFSVMVT-AITLLFVLSMRSEYTARATILIESTQAKAVSI 68
           E IDI      ++  +WR++L ++ V  AI L F  +    Y+A AT+LI+   ++ V  
Sbjct: 12  EFIDIDAAL-AIIRRQWRVVLAAIAVAGAIGLAFAATAVPIYSATATLLIDRNNSQIVEQ 70

Query: 69  EEVYGLDTKSQEYYLTQIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLK--ERL 126
               G   + +   L+Q+E+L+S+TI   V++ L L  + EF  +  S  S        L
Sbjct: 71  LSTIGGVVEDEASILSQVEVLQSETIGLAVVDSLKLTENQEFRATRASLLSSIFGTIRSL 130

Query: 127 VEWMPFLQGFKQEETVADPDLEAYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKL 186
           V    +    K+E  + D  L+    +RL+       + +  I +T  + + Y +  P L
Sbjct: 131 VNVSQWFSPTKKEAVIDDGTLKRSLSDRLL-----NDLSVKRIGRTYALELTYNSTSPVL 185

Query: 187 AAKIANEIARVYMDSHLEAKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVD 246
           AA+I N +A  Y+   L +K E   +A+ WL+ R+ ELR +  +++  +Q F     L+ 
Sbjct: 186 AAQIVNAVASAYLLDKLNSKYEATRRASDWLSDRIAELRQRALDTDLAVQKFRAEHNLIT 245

Query: 247 VQGVEGLATQELEELTSQMNKARDRRVAAETLYQVANSYSKNDSDLTALSSIPEISNHPT 306
                 L+ Q+L E  S +  A+     A    Q        D D+ A+  + +I +   
Sbjct: 246 TGNNGLLSDQQLAESNSALILAQSETAKARARVQRIEHILATD-DVDAV--VTDILDSSV 302

Query: 307 IRDLKVAEVDAERKVSEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQA 366
             DL+   +++ +  +E ++R G  H +      +++  R+ +  E+ ++     ++L+ 
Sbjct: 303 ANDLRKKYLESSKLETEITRRLGSSHIQAVRLRNEMQEYRRLMFQEISRIAQSYKSDLEV 362

Query: 367 AKQSERSLQTEFNQRKSEFQTLTVKNAKYSELKREVQTNRELFDLFLARQKETSASGDFN 426
           ++  E+SL     +      + +    +  EL+RE +T + ++  FL R +E      F 
Sbjct: 363 SEAKEKSLAESVAKATDISNSASETQVQMRELQREAETYKNMYQTFLQRYQEAMQQQSFP 422

Query: 427 TTIARFTDQASAPLTPSKPNKKLIVLLAFVVSFGFACVVAFIADAMTDTFADIKQVEKQL 486
            T AR   +A  P  PSKPNK +I++L  V+       +A   +     F    QV   L
Sbjct: 423 VTEARVISKAMPPYMPSKPNKPMILVLFMVMGAAAGGGIAIFREFRDRFFRTGDQVRDVL 482

Query: 487 ALSLLGVVPVVRKQ--------------RGKLDAKAYFDEKLRELTEAVRTIRTSYLLA- 531
            L  LG  P++  Q              R    A+   D  L    E +R+ R +  L  
Sbjct: 483 GLEFLGNTPLIPNQPTTEAQENGHPGLTRPTSVARYAVDHPLSSFAETLRSTRLAIDLGI 542

Query: 532 HVNQDQHVVMLTSCLPGEGKTTSSLNLALSLA-QMEKTLLIDCDLRKPAIAHRFGISGSQ 590
                  +V + S LP EGK+T S+NLA  LA Q  + LL+D D+R P          ++
Sbjct: 543 PAKTGARIVGVVSSLPSEGKSTISINLAQLLAGQGARVLLLDADIRNPGATRAMARHAAE 602

Query: 591 PGVTNLLNGTQSLEDCVYHDEQSGLDILTAGVYASNP--LELLSSSKFSELLADLRTRYQ 648
             +  LL G +S++D +  DE++ L  L   V    P   ELL+S++  +LLA+  + + 
Sbjct: 603 GLLEVLLEG-RSVQDVLLRDEKTYLAFLPTVVKQRVPHSSELLTSAQMHKLLAEASSAFD 661

Query: 649 RIVIDTPPCLAVSDSFMLAQYVDSVILVIDANHTRTPVVREVVGKLTQQGSRIDGVILNR 708
            I++D PP   V D+  +A  +D  I V +   T    VR  V        +  GVILN+
Sbjct: 662 YIIVDLPPLGPVVDARAMAGRIDGFIFVTEWGKTARRAVRNTVENEVHIRKKCLGVILNK 721

Query: 709 LNAKKASRY-----SGYYH--YQAYY 727
           ++ +K   Y     S YYH  Y  YY
Sbjct: 722 VDTEKLKLYRAYGSSEYYHSRYTRYY 747