Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 41.2 bits (95), Expect = 1e-08
 Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 17/136 (12%)

Query: 27  RLGVGDQIRI-------------QVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEE 73
           R+ +GDQ+RI              V    EL+  T V  +G I+YPFLG +++ G+   E
Sbjct: 49  RIRIGDQLRIVRDAGEMPTLSAFNVSTIYELTLYT-VQTDGKINYPFLGPVQVAGRQPSE 107

Query: 74  VKTTIHDGLLDGYLINPNVSVSILEY--RPFFVNGQVMKPGSYPYHPGLTVNKAITIAGG 131
           + T +   L   Y   P V+V+I +       V G V  P +       T+ +AI  AGG
Sbjct: 108 LATELTSKLAPIYR-EPRVTVNINQAPGSSIIVGGAVNNPTAVQLGTANTLEQAIIGAGG 166

Query: 132 FTERASKTNLFISSSD 147
            +   + + + +   D
Sbjct: 167 VSPAGNASMVALLRED 182