Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 44.3 bits (103), Expect = 4e-09
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 104 VNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLSKLQ 163
           V G V  P S+ YH G T+   I  AGG  +   +  +F+  ++       +ATL +K  
Sbjct: 525 VFGAVPSPASFAYHDGRTIGDFIETAGGIQKLGDRKEIFVVRANGTVLSDGRATLRAKAL 584

Query: 164 PGDILTV 170
           PGD++ V
Sbjct: 585 PGDLVFV 591



 Score = 37.4 bits (85), Expect = 5e-07
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 3/118 (2%)

Query: 16  PSLAVANDDFYRLGVGDQIRIQVYDEPELSFETRVSDN-GNIDYPFLGRIRLKGKTLEEV 74
           P+ +   DD YRL  GDQ+R+ +    + +      D+ G I  P +G + + G    ++
Sbjct: 128 PTTSAIPDD-YRLNPGDQLRLDLSGSVQANDVLLTIDSEGRIFVPKVGTLTVGGTRYGDI 186

Query: 75  KTTIHDGLLDGYL-INPNVSVSILEYRPFFVNGQVMKPGSYPYHPGLTVNKAITIAGG 131
              I   +   Y      VSV+ L+    +V G   +PG+Y      T+  A+  AGG
Sbjct: 187 HDAIAREVSRQYRNFELQVSVARLKGLTVYVTGFAARPGAYTVSSLSTLVNAVLAAGG 244



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 104 VNGQVMKPGSYPYHPGLTVNKAITIAGGFT 133
           ++G+V KPG Y   PG  +   +  AGG T
Sbjct: 390 ISGEVSKPGRYYVQPGTRLADVVAQAGGLT 419