Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., Capsule polysaccharide export protein from Sphingobium sp. HT1-2

 Score = 73.9 bits (180), Expect = 2e-18
 Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 9/153 (5%)

Query: 26  YRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHDGLL-D 84
           Y LG  DQ++I ++ +P+LS ETR+  +G +    +G +  KGKT  ++ + I       
Sbjct: 56  YLLGPDDQLKISIFGQPDLSTETRIKADGTVLLALVGPVDAKGKTTSQLASDIAASYAGG 115

Query: 85  GYLINPNVSVSILEY--RPFFVNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTNLF 142
           GYL  P+VSV + +Y  R   V G V + G+YP     TV   +  AGG T  A    + 
Sbjct: 116 GYLTKPSVSVEVSDYVSRSVTVLGNVPQAGNYPLDRNYTVASMLAKAGGAT-TAGANAVI 174

Query: 143 ISSSDDPEAKPTKATLLS-----KLQPGDILTV 170
           ++ +D   A     T +S      LQ GDIL V
Sbjct: 175 LTPADGSGAVRISLTDMSAGAGRPLQAGDILFV 207



 Score = 40.8 bits (94), Expect = 2e-08
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)

Query: 103 FVNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLSKL 162
           +V GQV +PG++ Y  G T  +A+ +AGG T   S  ++ +        +  +A L   +
Sbjct: 214 YVYGQVQQPGAFSYVAGQTFRQALALAGGPTLAGSTRSIKVKRG----GQEVQAKLDDPV 269

Query: 163 QPGDILTVAESFF 175
           +P D+L + E  F
Sbjct: 270 KPEDVLIIREKLF 282