Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., lipoprotein required for capsular polysaccharide translocation through the outer membrane (NCBI) from Escherichia coli BW25113

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 22/166 (13%)

Query: 26  YRLGVGDQIRIQVYDEPELSFETR-----------VSDNGNIDYPFLGRIRLKGKTLEEV 74
           YR+G GD + + V+D PEL+               V  +G + YP++G++ + GKTL E+
Sbjct: 85  YRVGPGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEI 144

Query: 75  KTTIHDGLLDGYLINPNVSVSILEYR--PFFVNGQVMKPGSYPY-HPGLTVNKAITIAGG 131
           ++ I  G L  Y+ +P V V+I  +R    +++GQV K G     +  LT+  AI  AGG
Sbjct: 145 RSDI-TGRLATYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGG 203

Query: 132 FTERASKTNLFISSSDDPEAKPTKATLLS-------KLQPGDILTV 170
            T+ A   N+ ++ +   E    +A + +        L PGDIL V
Sbjct: 204 LTDTADWRNVVLTHNGREERISLQALMQNGDLNQNRLLYPGDILYV 249