Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., Periplasmic protein involved in polysaccharide export from Kangiella aquimarina DSM 16071

 Score = 45.8 bits (107), Expect = 1e-09
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 3/95 (3%)

Query: 22  NDDFYRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHDG 81
           N+D Y +  GD+I I ++    LS    V + GNI  P +G I+L      +V + +   
Sbjct: 117 NED-YLVAPGDKISIWMWGAVNLSQVVTVDNQGNIFLPEIGPIKLSNTPASKVNSLVTSH 175

Query: 82  LLDGYLINPNVSVSILEYRP--FFVNGQVMKPGSY 114
           +   Y  N  V V++L   P   +V G V++PG Y
Sbjct: 176 IRKVYKSNVEVYVNLLSPTPVSVYVTGPVIRPGQY 210



 Score = 33.9 bits (76), Expect = 5e-06
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 104 VNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTNLFI 143
           V G+V+ P S  ++P  ++   I  AGG+TERA+   + +
Sbjct: 494 VGGEVLLPQSVVFNPNASIEDYIAWAGGYTERANHERIIV 533