Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 185 a.a., capsular biosynthesis protein from Escherichia coli ECRC62

 Score =  129 bits (323), Expect = 4e-35
 Identities = 72/181 (39%), Positives = 106/181 (58%), Gaps = 11/181 (6%)

Query: 5   LLSFLLCLLVW-------PSL---AVANDDFYRLGVGDQIRIQVYDEPELSFETRVSDNG 54
           L +FLLC ++        P L   A    + Y LG GD + I VY EPE++ +  +  +G
Sbjct: 6   LCTFLLCSILLVGCSSTRPPLTDDASTVTESYILGAGDTVNIMVYGEPEMTMKFIIDKSG 65

Query: 55  NIDYPFLGRIRLKGKTLEEVKTTIHDGLLDGYLINPNVSVSILEYRPFFVNGQVMKPGSY 114
            I +P++G++ LKGKT E+V   I   L   YL NP V+VSI E+R F+V+G+V  P  Y
Sbjct: 66  AITFPYIGKLMLKGKTAEQVGKEITKKLRGHYLQNPMVTVSIAEFRKFYVSGEVRNPNGY 125

Query: 115 PYHPGLTVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKATLLSKLQPGDILTVAESF 174
            Y PG+TV K+I +AGGFT+RA + ++ I  S + E     A L   ++PGD++ +   F
Sbjct: 126 AYEPGMTVEKSIALAGGFTDRADRKDINIRLSGNNELLENVA-LTHSVRPGDVVIIGMGF 184

Query: 175 F 175
           F
Sbjct: 185 F 185