Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., Periplasmic protein involved in polysaccharide export from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 8/134 (5%)

Query: 16  PSLAVANDDFYRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVK 75
           P+L +     Y +G GDQ+ I +Y + + S++  V+  G +  P +G I + G T++   
Sbjct: 141 PNLNIPTPQSYVIGTGDQLLIDIYGDSQQSYDLSVNPEGRVYIPNVGPINVGGSTIQAAT 200

Query: 76  TTIHDGLLDGYL----INPNVSVSI----LEYRPFFVNGQVMKPGSYPYHPGLTVNKAIT 127
             I   L   Y      NP   + I    +      + G++  PG Y      +V  A+ 
Sbjct: 201 ARIKRELSSIYADLNSSNPRTFMQIRLGNIRSIQVAMVGELQNPGDYTLPSFASVFNALY 260

Query: 128 IAGGFTERASKTNL 141
            AGG   + S  N+
Sbjct: 261 AAGGPNRQGSFRNI 274



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 13/34 (38%), Positives = 22/34 (64%)

Query: 104 VNGQVMKPGSYPYHPGLTVNKAITIAGGFTERAS 137
           ++G+V +PG++ +   +TV   +  AGGF E AS
Sbjct: 493 ISGEVNRPGAFAFADNMTVEDLVLKAGGFKESAS 526



 Score = 31.2 bits (69), Expect = 5e-05
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 98  EYRPFFVNGQVMKPGSYPYHPGLTVNKAITIAGGFTERASKTNLFISSSDDPEAKPTKAT 157
           E +   + G+V+ P S  +  G +    I+ AGGFT+ A K   ++  ++  + K TK  
Sbjct: 753 ELQTIRMRGEVLFPTSARFESGKSFKGYISKAGGFTDNARKGKSYVIYANG-DVKRTKNF 811

Query: 158 LL----SKLQPGDILTVAE 172
           +      K++PG  + V E
Sbjct: 812 IFFKDYPKMEPGAEIIVPE 830