Pairwise Alignments

Query, 175 a.a., polysaccharide biosynthesis/export family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., polysaccharide export protein Wza from Alteromonas macleodii MIT1002

 Score = 49.3 bits (116), Expect = 4e-11
 Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 17/170 (10%)

Query: 22  NDDFYRLGVGDQIRIQVYDEPELSFETRVSDNGNIDYPFLGRIRLKGKTLEEVKTTIHDG 81
           N+  Y +G GD + I V+  PE+S    V  +G +    +  I + GKT   +   I + 
Sbjct: 42  NEYQYLIGPGDSLTIFVWRNPEVSGNFIVRPDGKVTTSLVEDIDVAGKTPTMLAREIEE- 100

Query: 82  LLDGYLINPNVSVSILEY-----RPFFVNGQVMKPGSYPYHPGLTVNKAITIAGGFTERA 136
            L  Y+ NP V+VS+  +         V G+   P +  Y   +T+   +   GG TE A
Sbjct: 101 QLSTYINNPRVTVSVNNFTGPLSEQVRVIGEATNPSAVSYSEHMTLLDLMIAVGGLTEFA 160

Query: 137 SKTNLFISSSDDPEAKPTKATL--------LSK---LQPGDILTVAESFF 175
                 +    D + K  +  +        +SK   + PGDI+ + E++F
Sbjct: 161 DGNGAKLVRVVDGKQKTFEIKIDDLIRDGDISKNVDMLPGDIVIIPEAWF 210