Pairwise Alignments

Query, 398 a.a., TetR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  142 bits (357), Expect = 2e-38
 Identities = 92/360 (25%), Positives = 159/360 (44%), Gaps = 7/360 (1%)

Query: 31  PNPIVTESGMAVVPFLNLSTGYNDNLAKSNQQQDSSAFSVIESGVGFIVEPQSSKTQLGY 90
           P  I     MA  P +++S  Y DN     +  +SS  S +       +E   S   L Y
Sbjct: 24  PQGIPLGEMMAFTPTIDVSGRYEDNFRAVEKGAESSFISRLSPAFVLSMEGAKSAYLLEY 83

Query: 91  RFRNGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHEGRGENDTTLGLDYNQ 150
           R    T+ SS +DN TD +L L + +E +SR+R+  +      H+          L  ++
Sbjct: 84  RADVDTFLSSAKDNNTDQHLTLDAGYEFDSRNRLLLDAGF---HKVEDTESQEQHLQNDR 140

Query: 151 YESHSANLGYGFGSTEAIGRIETNIGWQDFTYQNNRTITQYQDWDELRFNSTFYYQALPR 210
           Y + +A   Y +G+  A  +++    ++   YQN   +   ++ +     ST YY   P+
Sbjct: 141 YTTTNAGGVYTYGARTARTQVDLAADYEQLRYQNTEHLNAERERNTTALRSTVYYAIAPK 200

Query: 211 TSFIAQVIANSRRYDLIAPGASSKDNNHYFGYLGASWDATGKLRGNAKLGYQQKDFDAAS 270
           T  + +       +D ++       N    G  G  WDAT K  G  ++G ++K FD  +
Sbjct: 201 TKLLLE--GRHSVFDYLSNDNLDSSNAALLG--GLVWDATAKTSGTLRVGGERKSFDHGN 256

Query: 271 RKDFDSFSWDVDVTYLVRTYSALQLVTNRRSTDSDGDGDAIDAATYQVNWSHNWNTQWTT 330
           +       W+V  T+  RTYS   + T R   +      AI A +  ++W H W  ++ +
Sbjct: 257 QDSLQGSLWEVGATWKPRTYSTFGVKTRRGLDEGYFGATAIKAQSTTLSWEHQWVERFGS 316

Query: 331 EAALTRLEEDYTASNRDDETTNASLRASYDFRRWLTFELGVGRERKDSNIDSLSYSQNVY 390
           E + TR    Y + +R+D+     + ++Y   RWL  + G    + DS+    SY +NV+
Sbjct: 317 EVSYTRSSNKYHSIDREDKIDQFGIGSTYKMYRWLDLKAGYKYVKDDSSYAGQSYRRNVF 376