Pairwise Alignments

Query, 398 a.a., TetR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., outer membrane beta-barrel protein from Pectobacterium carotovorum WPP14

 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 90/376 (23%), Positives = 146/376 (38%), Gaps = 33/376 (8%)

Query: 39  GMAVVPF---LNLSTGYNDNLAKSNQQQD--SSAFSVIESGVGFIVEPQSSKTQLGYRFR 93
           G+A + F   + L  G+ +N+      Q+  SS F  +   +  I      +  L Y   
Sbjct: 28  GVAGIDFQSQVGLDYGHENNVTYQADDQNAVSSHFQSLRPMIKAIGARYQDQYLLMYSGD 87

Query: 94  NGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHE--GRGENDTTLGLDYNQY 151
              Y S   DN+TDH+      W    RH +      AL HE  GRG  +      ++ +
Sbjct: 88  YRRYDSDPADNYTDHFFRFNGAWRYGLRHGLTLSLEEALGHEVRGRGITEGFRPQQFSNF 147

Query: 152 ESHS--------ANLGYGFGSTEAIGRIETNIGWQDFTYQNNRTITQY----------QD 193
             HS        + L Y +G+ +  G+ +  + ++         I             Q+
Sbjct: 148 GIHSPLSTALFNSELRYSYGALKGRGKADVALLFRKLRLGRTEDIKNTDIDFYNYVLGQE 207

Query: 194 WDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYFGYLGASWDATGKL 253
           W E    +    Q    T F  + I N RRY++     S KDNN Y+   G     TGK 
Sbjct: 208 WYENGLIAELSDQYSSATRFRYRFIGNQRRYEI----DSQKDNNEYYLEFGIKSQLTGKT 263

Query: 254 RGNAKLGYQQKDFD-AASRKDFDSFSWDVDVTYLVRTYSALQLVTNRRSTDSDGDGDAID 312
             +A + +  K FD   + + F   +WD+   +     S     T++   D    G  I 
Sbjct: 264 GIDANVSWLYKTFDNNPNSRGFSGINWDIQTEWKPLKQSVFTAHTSQHIKDPSEIGGYIL 323

Query: 313 AATYQVNWSHNWNT-QWTTEAALTRLEEDYTASNRDDETTNA--SLRASYDFRRWLTFEL 369
            + Y +++ H W   +++T    + L + Y    RD +  N   +   SY+FR  +  EL
Sbjct: 324 VSKYGISYQHFWLVDRFSTTFDYSYLTDVYKNYPRDRKDRNRVFTFAMSYNFRPSINAEL 383

Query: 370 GVGRERKDSNIDSLSY 385
                   SN DS S+
Sbjct: 384 KYQLNTLRSNQDSDSF 399