Pairwise Alignments

Query, 398 a.a., TetR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., capsular biosynthesis protein from Escherichia coli ECRC62

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 95/390 (24%), Positives = 160/390 (41%), Gaps = 40/390 (10%)

Query: 27  AKPTPNPIVTESGMAVVPFLN---LSTGYNDNLA---KSNQQQDSSAFSVIESGVGFIVE 80
           A+P P    + +G+A V F +    + GY+DN+     S++++DS  F  I   +  + E
Sbjct: 19  AEPIPK---SHTGIAGVDFQSDVAANYGYSDNITFQPHSSKEKDS-VFQSITPTLSMVGE 74

Query: 81  PQSSKTQLGYRFRNGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHEGRGEN 140
               K  L Y      Y     DN+ DH+      W    +H +      +L HE RG  
Sbjct: 75  RFQDKYLLMYSGDYRRYDKDSADNYNDHFFRFNGAWRYGLKHGLTLNLEDSLGHEERGRG 134

Query: 141 DTTLGLDYNQYESH-----------SANLGYGFGSTEAIGRIETNIGWQDFTY-----QN 184
             T G    Q+              ++ L Y +G+ E  G+ E  + ++   +       
Sbjct: 135 -ITEGFVQEQFRQFGITSPLSPHFVNSELRYSYGAPEGRGKAELALQYKKLRFGKTGGVR 193

Query: 185 NRTITQY-----QDWDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHY 239
           N  +  Y     Q+W E    +  Y Q    T F    I N RRYD +    S KD+N Y
Sbjct: 194 NADVDFYNYLLEQEWYENSLIAEVYDQYTANTRFRYSFITNQRRYDRL----SEKDSNEY 249

Query: 240 FGYLGASWDATGKLRGNAKLGYQQKDFD-AASRKDFDSFSWDVDVTYLVRTYSALQLVTN 298
           +   G     + K   +  + +  K F+  A+ ++F+  +WD+   +     S + L T+
Sbjct: 250 YLRYGVKSQLSDKTNIDMNVAWLYKTFENNANARNFNGLNWDIQGEWKPLKQSVVTLHTS 309

Query: 299 RRSTDSDGDGDAIDAATYQVNWSHNW-NTQWTTEAALTRLEEDYTA--SNRDDETTNASL 355
           +   D    G  I    Y V++ H W   +++T    +   EDY     NR D     ++
Sbjct: 310 QNIKDPSEVGGYILFTKYGVSYQHFWLGDRFSTTLDYSLSREDYKKQDKNRRDRNGVFTM 369

Query: 356 RASYDFRRWLTFELGVGRERKDSNIDSLSY 385
           + SYD+   +  EL     + DSN ++ S+
Sbjct: 370 KMSYDYTPSVNVELKYLLNKLDSNKNTDSF 399