Pairwise Alignments

Query, 398 a.a., TetR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., outer membrane beta-barrel protein from Dickeya dianthicola ME23

 Score = 84.3 bits (207), Expect = 6e-21
 Identities = 86/376 (22%), Positives = 149/376 (39%), Gaps = 33/376 (8%)

Query: 39  GMAVVPF---LNLSTGYNDNLAKSNQQQD--SSAFSVIESGVGFIVEPQSSKTQLGYRFR 93
           G+A + F   + L  G+ +N+      QD  S+ F  +   +  I      +  L Y   
Sbjct: 28  GIAGIDFQSQVGLDYGHENNVTYQADDQDAVSADFQSVRPMIKAIGARYQDQYLLMYSGD 87

Query: 94  NGTYFSSQQDNFTDHYLDLTSDWELNSRHRIGFEYNLALAHE--GRGENDTTLGLDYNQY 151
              Y     DN+TDH+      W     H +    + +L HE  GRG  +      ++ +
Sbjct: 88  YRRYNGDPADNYTDHFFRFNGAWRYGQMHGLTLSLDDSLGHEVRGRGITEGFRPQQFSDF 147

Query: 152 ESHS--------ANLGYGFGSTEAIGRIETNIGWQDFTYQ-----NNRTITQY-----QD 193
             HS        + L Y +G+ +  G+ +  + ++           N  I  Y     Q+
Sbjct: 148 GIHSPLSTTLFNSELRYSYGALKGRGKADVALLFRKLRIGRTADIKNTDIDFYNYILGQE 207

Query: 194 WDELRFNSTFYYQALPRTSFIAQVIANSRRYDLIAPGASSKDNNHYFGYLGASWDATGKL 253
           W E    +    Q    T F  + ++N RRY++     S KDN+ Y+   G     T K 
Sbjct: 208 WHENGLIAELSDQYSLATRFRYRFMSNQRRYEI----DSQKDNDEYYLEYGIKSQLTDKT 263

Query: 254 RGNAKLGYQQKDF-DAASRKDFDSFSWDVDVTYLVRTYSALQLVTNRRSTDSDGDGDAID 312
           R +A   +  K F +  + +DF   +WD+   +     S   + T++R  D    G  I 
Sbjct: 264 RVDANASWLYKTFNNNPNSRDFSGVNWDIQAEWQPLKQSVFTVHTSQRIKDPSEIGGYIM 323

Query: 313 AATYQVNWSHNWNT-QWTTEAALTRLEEDYT--ASNRDDETTNASLRASYDFRRWLTFEL 369
            + Y + + H W   +++T    + L + Y    ++R D     +   +Y+FR  +  EL
Sbjct: 324 VSKYGIAYQHFWLVDRFSTTFDYSYLTDSYKNYPNDRKDRNRVFTFAMNYNFRPSINVEL 383

Query: 370 GVGRERKDSNIDSLSY 385
                   SN DS S+
Sbjct: 384 KYQLNTLHSNQDSDSF 399