Pairwise Alignments

Query, 438 a.a., polymerase from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 66.6 bits (161), Expect = 1e-15
 Identities = 108/449 (24%), Positives = 175/449 (38%), Gaps = 80/449 (17%)

Query: 9   FFAFLLFVFWLPIPLGSNRPWAWSLNEIYVAFLLLGCLFLLPAAQCWLAIQ--------- 59
           F  F+  +   P+PLGS RPW+ +L     A  LLG +     A  W  +          
Sbjct: 3   FTVFVAVLVLAPLPLGSFRPWSGAL-----AATLLGLI-----ATAWALVTLRAPETPGV 52

Query: 60  RAKVILIPVALF---TLWSWMQSWPSLGLSSDQTLVFISAVKSLHYLQICL--------- 107
            A+V+ +P+AL+    +W  +Q  P      D   ++  A  +L  L   +         
Sbjct: 53  SARVLALPLALYGAALIWGLVQILPLAPEGWDHP-IWAQAEAALGPLPRRISMAPAAGRD 111

Query: 108 -VAALLVD------------TPHKLKMLATTMIASGICQAFYAGVILLLELQTSPFFSLP 154
            +A LL D            +P +   L   +  +    A Y G+++      + F+   
Sbjct: 112 ALAQLLADGLAFLLAVQMGRSPRRAARLVEALALASGAIALY-GLVVYFSGSETIFWLEK 170

Query: 155 LNQRA--SGSFVYHNHLANFLMLNLCLGFGLLIAELNHQTTQGWRNTLKKLLAILLSDKA 212
              R   +   V  NH A    L L        A L     +G R  L+ LL      K 
Sbjct: 171 WAYRGDLTAVLVNRNHYATLAGLGLLCSVS---ASLARWEQRGGRECLRGLLG----GKD 223

Query: 213 FIRLGLV----IMVIALVLTRSRMGNIAFFVALSIGSLLILLFYKSKPKSLYLLIVSLFI 268
            +  GL+    +  +AL  T SR G         +G  L+L+  + +      +++ L  
Sbjct: 224 RLTAGLLASGGLTALALPFTHSRAG----MAVAVLGLCLLLVLSQQRNWKRLAILLGLTC 279

Query: 269 VDALVVSNWFGLDKVRQRLAETSLQNESRDDVVRDALNAIQERPLTGFGNGTFYSTFPSY 328
             AL+      + ++ +RL E       R  V + +   + ERP  G G G F   F + 
Sbjct: 280 GAALIA-----VLEMDERLTELGADVPQRMRVWQLSWELLAERPWLGQGLGAFPDAFQAI 334

Query: 329 NQGEVALFYDHAHNDYVQFTLESGL-IATSVFGIMVLFCAWR--ALSAFRNRTNKTMRGI 385
             G +   +  AHN +++  +E G   A S+F  +    AWR   ++A R   N+ +  +
Sbjct: 335 RPGSITQIWTQAHNSWLELMVELGAPAACSLF--LAAGWAWRRCLVAAVRRHRNRDLPAL 392

Query: 386 GLGSLMAIIGMLL--HMSVDFPLQAPATA 412
           G     A  G+L+  H  VDF  Q PA A
Sbjct: 393 G-----AAAGLLVGAHALVDFSPQIPAVA 416