Pairwise Alignments

Query, 438 a.a., polymerase from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 104/441 (23%), Positives = 170/441 (38%), Gaps = 59/441 (13%)

Query: 9   FFAFLLFVFWLPIPLGSNRPWAWSLNEIYVAFLLL-----------------------GC 45
           F+ FL  V   P+PLG+NRP AW+   + +A L +                       G 
Sbjct: 8   FWIFLATVSLAPLPLGANRPLAWTALAMAMAVLSILWPLAVLRERGAPSNGLGPLAIPGV 67

Query: 46  LFLL----PAAQCWLAIQRAKVILIPVALFTLWSWMQSWPSLGLSSDQTLVFISAVKSLH 101
            FL      AAQ WLA          VA   LW+ + +  S+   +   L    +  +  
Sbjct: 68  AFLCVAGWAAAQTWLAPPF-------VAWHPLWTDVAALLSVAPKTVGRLGLAPSAAAEG 120

Query: 102 YLQI-CLVAALLVDTPHKLKMLATTMIASGIC--QAFYAGVILLLELQTSPFFSLPLNQR 158
            +++ C      +   H         +  G+    A YA +  L      P   L + + 
Sbjct: 121 LVRLSCYALTFWLAYQHAASGRRADALVDGLAVVAALYA-LYGLAAFNADPPMVLWMEKW 179

Query: 159 A-----SGSFVYHNHLANFLMLNLCLGFGLLIAELNHQTTQGWRNTLKKLLAILLSDKAF 213
           A     + +FV  N  A +  L L      ++  L      G R +  +LL  L     F
Sbjct: 180 AYRDNLTSTFVNRNSYATYAGLGLLAASAAVVRRLEG----GGRRS--RLLRHLARPTLF 233

Query: 214 IRLGLVIMVIALVLTRSRMGNIAFFVALSIGSLLILLFYKSKPKSLYLLIVSLFIVDALV 273
             L  + ++ ALV T SR G  A  V +++ +  +L      P+     +    +  A+V
Sbjct: 234 YLLTAIPVIAALVATGSRGGMAAAAVGMAVFAYGLLSPRWGWPRRA---MAGAALAGAVV 290

Query: 274 VSNWFGLDKVRQRLAETSLQNESRDDVVRDALNAIQERPLTGFGNGTFYSTFPSYNQGEV 333
           ++    LD      A  +  +  R  VV   L  I E P TG+G G+F   F       +
Sbjct: 291 LAFLVFLDHGATHPASEAA-DRLRVYVVTAGL--IAESPWTGYGLGSFPDVFAMARPASI 347

Query: 334 ALFYDHAHNDYVQFTLESGL-IATSVFGIMVLFCAWRALSAFRNRTNKTMRGIGLGSLMA 392
           +  +  AHN Y++  +E G+  A  +   +    A    +AFR+R  +    +G  +   
Sbjct: 348 SQVWLQAHNLYLELAMELGIPAALGLLSAIAWVFAACLRAAFRHRGRRVHVSLGCAATAL 407

Query: 393 IIGMLLHMSVDFPLQAPATAL 413
           +    +H  VDF +Q PA A+
Sbjct: 408 V---AVHSLVDFSMQIPAVAI 425