Pairwise Alignments

Query, 446 a.a., capsule biosynthesis protein CapK from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Phenylacetate-coenzyme A ligase from Xanthobacter sp. DMC5

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 96/374 (25%), Positives = 150/374 (40%), Gaps = 59/374 (15%)

Query: 88  PYLDKSVLRRDHK-QFISQNKPSVVVKGATSGTTGTPLTI---LQDRHSVIREQAFVARQ 143
           P++DKS+LR  +   F++     V    ATSGTTG P+T      D HS++  Q  +AR 
Sbjct: 59  PFMDKSLLRDLYPFPFLTVPMDKVERFVATSGTTGLPVTFGMTKNDLHSLLPSQ--MARL 116

Query: 144 LAWAGYRKGDKR-------AWIRGDMVVPLSQKQGPFWRYSWFEQMIVLSSFHLTPKTMS 196
           L  AG + G +         WI G  +       G              ++F + P    
Sbjct: 117 LTAAGVKPGFRAYQGYGYGLWIGGPALDAGFSAVG-------------CTNFPIGPGRGE 163

Query: 197 SYLQAMVDFGVEVIQAYPSSIATLARYLEANQSYYPAK---LKSIMTSSESLSAEDRQVI 253
              + + D   +V    P  + TL +  + +Q   P     LK  +   +S+SAE R  +
Sbjct: 164 LAARWLRDHAYDVASMSPLWLMTLVQAAK-HQGINPRNDWTLKVAILGGQSVSAEFRAQL 222

Query: 254 ETRF--GCKVFDWYGLFERVAAIGQCEHGRYH-------LLSDYSHVELL------AAGD 298
           E     G    + YG  E    I        H       L  D   VE+L         +
Sbjct: 223 EAEMPEGFMSHNIYGTTEAGGPILAISTPFTHADDELQLLNEDTVIVEILDPKTMKPVSE 282

Query: 299 GRY-ELVGTNFNNQYFPLIRYKTGDHVHLSENE-ACPCG-RVFPVIERIEGRIGDYL--- 352
           G   E+V T    +  P++R++T D V LS     CP G R    I RI GR  D +   
Sbjct: 283 GEVGEIVITTLRKEASPVVRWRTRDLVRLSPRPYDCPSGRRGMRKIGRIIGRTDDMIKFK 342

Query: 353 --VGEDGQKVHILNHIPKGIAGIMACQFVQSE-----RGQIVVKVVADAEQFNQEQQKQL 405
             +    Q   ++  IP G+A      +V  E     +  + V+ VA +++  ++    +
Sbjct: 343 GVIVFPSQIEDVIAGIP-GLAKEAWQIYVDKEATTIGKMTVAVEAVAASQRPGEDAAADV 401

Query: 406 ISNTQARLGSSLNV 419
               +ARLG ++NV
Sbjct: 402 RREIKARLGINVNV 415