Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1052 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

 Score =  530 bits (1364), Expect = e-154
 Identities = 314/1015 (30%), Positives = 547/1015 (53%), Gaps = 17/1015 (1%)

Query: 4    SDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQI 63
            S++ ++RPV   ++ + L V G+ ++ +L V  +P ++ P +++S    GAS   + + +
Sbjct: 3    SELCIRRPVMTTLIMLSLVVAGLFAYRQLPVAALPRVDFPTINISASLPGASPETMATSV 62

Query: 64   TSVLEDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEA 123
             + +E QLA I+GI  +TS S  G + ITV F+L   ++    D++ A++ AQR LP+E 
Sbjct: 63   ATPIERQLATIAGISSLTSSSTQGSTSITVQFDLNRSIDAAALDVQSALSVAQRQLPDEM 122

Query: 124  DDPQVFKNNGSGQASVYI-NLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYK 182
              P  F+      A V +  +SS  +  + + +Y + ++  + S + GV+ V + G    
Sbjct: 123  TTPPSFRKVNPADAPVILLAISSDTLPLSAVNEYADTLIGQQISQLPGVAQVQIYGSQKY 182

Query: 183  VMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEY 242
             + +R+ P     R ++  DI  A+      +P G V       ++        A  F  
Sbjct: 183  AVRIRVDPAAAGARNISADDIQRAVEAAASNTPLGIVSGPKQAQTIDMGTPKADASQFRR 242

Query: 243  LVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHE 302
            +VVK A DG+ + L+++A V  G ENE      +    V + +V Q DAN ++V   V  
Sbjct: 243  VVVK-ARDGSVVRLEEIAVVSDGVENERVASWFNDRRAVVLAVVRQPDANTVQVVDEVRN 301

Query: 303  EVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIP 362
             + + +  LP    + +  D +V +  ++++V  TLF    LV+LV+++F+  +RAT+IP
Sbjct: 302  RLPQFRAQLPGSVGIEVLNDRSVSVRDAVADVQKTLFEAIVLVVLVIFLFLRNVRATIIP 361

Query: 363  AVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLL 422
            ++ +P+S+I+ F A + FG+SIN +TL+AL L +G VVDDAIVV+ENI+ H+E GE P  
Sbjct: 362  SLALPLSIIATFAAMWGFGYSINNMTLLALTLCVGFVVDDAIVVLENIYRHVEAGESPFR 421

Query: 423  AAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLT 482
            AA +G+RE+GF +I+ TL LV VF+P+ FM G+VG +F EF+V +++A++ S  ++LTLT
Sbjct: 422  AALRGSREIGFTIISMTLSLVAVFIPVLFMGGVVGRVFREFAVTISVAILVSGFVSLTLT 481

Query: 483  PVLGSKLLKA---NVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGS 539
            P+L ++++K      KPG F ++ +R+F    + YR  +   +R +    VV  A IG S
Sbjct: 482  PMLCARVMKPVDHTKKPGWFFRVTERMFDSWLNAYRVSLDFVLRRKPFMLVVTFATIGLS 541

Query: 540  YGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSFSI 599
              L  ++P    P ED G I   V  A  +S+  M      V   +       ++ S   
Sbjct: 542  VYLYIVIPKGFFPQEDNGFITGTVEAATDSSFAAMVERQKQVADVVRADPAVDYIVS--- 598

Query: 600  QSPAFGGNAGDQTGFVIMILEDW----NDRTVTAQEALSQVRKALAGIPDVRVF--PFMP 653
             + A G +    TG + + L+       +R  +A + +  +RK +A +P V VF  P   
Sbjct: 599  TAGATGSSRTTNTGRLFIALKPKGNGPGERVGSANDVIQGLRKRVAQVPGVNVFFQPVQN 658

Query: 654  GFRGG--SNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTID 711
               GG  S    Q+ L   D   L  +A+ +E+   + P +     D     P+L + +D
Sbjct: 659  INVGGVASKSQYQYTLQSPDTETLYAFAQTMEQRLAQLPGLRDVTSDLQITNPQLTIELD 718

Query: 712  KQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMR 771
            K +AA LGI+ + + D L    G +++ T      ++ +          + +DL ++Y+R
Sbjct: 719  KDKAAALGITEQQLRDALYTQFGTRQIATLYTPTNQFAIIAEVQPIFQRDPSDLGRVYLR 778

Query: 772  TATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEI- 830
            T +G +V L+TV  I      + + H  +Q SVTI+ NL  G +LGQA++ ++  A E  
Sbjct: 779  TTSGNVVPLETVANIKRTVGPLSIQHQQQQPSVTISFNLAPGTSLGQAVEEINAAAAEAR 838

Query: 831  LPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVF 890
            +P+ +   + G ++ F+++ S+  ++   A++V Y+VL   +ESFI+P+ ++  +P    
Sbjct: 839  VPDSVIPGFQGTAQVFQDSLSNQPLLILAAVVVIYIVLGVLYESFIHPITILSGLPSAGI 898

Query: 891  GGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDASARR 950
            G  L L   G  +++ + IG+IML+G+V KN I++++ A + R  G   + AI +A+  R
Sbjct: 899  GALLTLMAAGMELSVIAIIGIIMLVGIVKKNAIMMIDVALERRRAGAAAQDAIREAALLR 958

Query: 951  LRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMY 1005
             RPI+MT    + G +P+ +  GAG E R  +G  +  G+  + L+TL + P +Y
Sbjct: 959  FRPIMMTTLAAIFGVLPIAIGAGAGSELRQPLGVAVVGGLLVSQLLTLFITPVVY 1013