Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1029 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

 Score =  486 bits (1252), Expect = e-141
 Identities = 307/1012 (30%), Positives = 523/1012 (51%), Gaps = 26/1012 (2%)

Query: 8    VKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVL 67
            V  PVA L+L+  L + G+++F +LA+  +P+ E P + V+    GAS   + S + + L
Sbjct: 10   VDHPVATLLLTFALVLLGLIAFPRLAIAPLPEAEFPTIQVTATLPGASPDTMASSVATPL 69

Query: 68   EDQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDPQ 127
            E Q + I G+ ++TS S  G S +T+ F L   ++T   +++ A+  A   LP +     
Sbjct: 70   EVQFSAIPGMTQMTSSSALGSSLLTLQFTLTKSIDTAAQEVQAAINTASGKLPSDMPSLP 129

Query: 128  VFKNNGSGQASVYI-NLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVMYV 186
             +K      + V I ++SS+ M  T+L+DY+E +L  + S I GV  ++++G     + V
Sbjct: 130  TWKKVNPADSPVLILSVSSNSMPSTELSDYVETLLARQISQIDGVGQINITGQQRPAIRV 189

Query: 187  RIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEYLVVK 246
            +  P+ +A  G+  +DI  A+ + +L    G +  +++V ++ T       ED+  L+V 
Sbjct: 190  QASPDKLAAIGLTLADIRLAIQQSSLNLAKGAIYGENSVSTLSTNDQLFHPEDYAQLIVS 249

Query: 247  RASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHEEVDK 306
               DG P+ L+D+A V  G+EN      +     V++ I  Q  AN +E   R+  E+ +
Sbjct: 250  Y-KDGAPVQLRDIAKVINGSENAYVQAWAGDTPGVNLVISRQPGANIVETVDRIQAELPR 308

Query: 307  VQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIPAVTV 366
            +Q  LP   ++++  D T  I  S+ EV  TL I   LV+ V+ +F+ QL AT+I +  +
Sbjct: 309  LQAMLPASVQVSVLTDRTKTIRASLHEVEVTLLIAILLVVAVMALFLRQLSATMIVSSVL 368

Query: 367  PVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLLAAYK 426
             VSL+++F   Y  GFS+N +TL+A+++++G VVDDAIVVVENI  H+E G     AA K
Sbjct: 369  GVSLVASFALMYLMGFSLNNLTLVAIVIAVGFVVDDAIVVVENIHRHLEAGLDKREAAIK 428

Query: 427  GTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLTPVLG 486
            G  E+GF V++ +  LV  F+P+ FM G+VG LF EF++     ++ S +++LTL P L 
Sbjct: 429  GAGEIGFTVVSISFSLVAAFIPLLFMGGVVGRLFKEFALTATSTILISVVVSLTLAPTLA 488

Query: 487  SKLLK-----ANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGSYG 541
            +  ++     A+ KPG F++       RL +GY + + RA+  +     +    +  +  
Sbjct: 489  ALFMRAPTHHAHDKPG-FSE-------RLLAGYARNLRRALAHQRTMAAIFVVTLALAVV 540

Query: 542  LMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSFSIQS 601
                +P    P +D G +      A   SY  M A    + + +        + +FS   
Sbjct: 541  GYVFIPKGFFPVQDTGFVLGTSEAAADVSYPDMVAKHKALAEIVK---ADPAVAAFSHSV 597

Query: 602  PAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIPDV----RVFPFMPGFRG 657
               G N     G   + L+D  DR V+A + + ++R  LA +P +    R    +    G
Sbjct: 598  GVTGSNQTIANGRFWIALKDRGDRDVSASQFIDRIRPKLAKVPGIVLYLRAGQDINLSSG 657

Query: 658  GSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAAE 717
             S    Q+VL  +D   L TW ++L E+   +P       D         ++ID+Q AA 
Sbjct: 658  PSRAQYQYVLKSNDGPTLNTWTQRLTEKLRANPAFRDLSNDLQLGGSITHISIDRQAAAR 717

Query: 718  LGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRT-ATGE 776
             G++   +   L    G +++  F     +Y V L  D      A  L+  Y+R+  T E
Sbjct: 718  FGLTATDVDQALYDAFGQRQINEFQTEINQYQVVLELDTQQRGKAESLNYFYLRSPLTNE 777

Query: 777  LVTLDTVTRID-EVASAIRLAHYNKQKSVTITANLEAGYTLGQALDFLDQKAQEI-LPND 834
            +V L  + ++D      + ++H     +  ++ NL  G  LG A+  L+Q   EI +P  
Sbjct: 778  MVPLSALAKVDPPTVGPLSISHDGMFPAANLSFNLAPGVALGDAVIMLNQAKNEIGMPTT 837

Query: 835  ISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLVVMLTVPMGVFGGFL 894
            +  ++ G ++ F+ + +S   +   AL+  Y++L   +ESF++PL ++ T+P    G  +
Sbjct: 838  LIGNFQGAAQAFQSSLASQPWLILAALVAVYIILGVLYESFVHPLTIISTLPSAGLGALI 897

Query: 895  GLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQL-RDRGVEFEKAIIDASARRLRP 953
             L +MGQ  +I + IG+++LIG+V KNGIL+++FA +  R RG+  E AI +A   R RP
Sbjct: 898  MLSLMGQDFSIMALIGLVLLIGIVKKNGILMIDFALEAQRVRGLSPEDAIYEACVTRFRP 957

Query: 954  ILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMY 1005
            I+MT    L G++PL++ TG G E R  +G  +  G+  +  +TL   P +Y
Sbjct: 958  IIMTTLAALLGAVPLMLGTGPGAEMRQPLGIAVVGGLLVSQALTLFTTPVIY 1009