Pairwise Alignments

Query, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1055 a.a., hydrophobe/amphiphile efflux-1 family RND transporter from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  513 bits (1320), Expect = e-149
 Identities = 317/1030 (30%), Positives = 548/1030 (53%), Gaps = 34/1030 (3%)

Query: 8    VKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVL 67
            +KRPV A+V+S+++   G ++  +L + + P+I    V++   Y G+SA ++       L
Sbjct: 6    IKRPVFAIVISVMIVFVGSLAIRQLPISQFPEIAPTTVNIFIAYPGSSADVLVKSTLITL 65

Query: 68   EDQLAGISGIDEI-TSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDP 126
            E  + G+ G+  I T  +  G + + V FE G D N  V  ++  V +    LPE     
Sbjct: 66   EQAINGVEGMRYIATDATSAGEATLRVIFEPGTDPNDAVVRVKTRVDQVMPLLPELVQRE 125

Query: 127  QVFKNNGSGQASVYINLSSSE--MDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVM 184
             V          +Y+NL S    MD   L +Y    ++       GV+   + G     M
Sbjct: 126  GVVITPIQPSMLMYVNLYSKNESMDEKFLFNYATVKMIPEIQRTKGVARAQILGSRRYAM 185

Query: 185  YVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMS-----VRTARG-YQSAE 238
             V + P+ M    ++  ++ +AL ++++    G++   S + +     V T +G Y   E
Sbjct: 186  RVWLNPDRMRAYSISVEEVMEALGEQSIIGRPGRIGQSSGIAAQSLEYVLTYKGRYSEPE 245

Query: 239  DFEYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAK 298
            ++E ++++  ++G  I+LKD+A V +G+E  +     DG  + ++ +     +N  +V  
Sbjct: 246  EYENIIIRANAEGESIHLKDIATVELGSEFFDIYSNLDGHPSAAIVLKQNYGSNASDVIA 305

Query: 299  RVHEEVDKVQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRA 358
             V +++++++ + P G    I YD + F++ SI +V  TL     LV +V++IF+G  R+
Sbjct: 306  EVKDKLEEMRPYFPPGMDYKISYDVSPFLDASIEQVIHTLRDAFILVAIVVFIFLGDWRS 365

Query: 359  TLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGE 418
            TLIP + VPVSLI AF    +FG SINL+TL AL+L+IG+VVDDAIVVVE +  H +  E
Sbjct: 366  TLIPILAVPVSLIGAFFVIQFFGLSINLVTLFALVLAIGIVVDDAIVVVEAV--HAKMEE 423

Query: 419  KPLLAAYKGTR----EVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFS 474
            +P L+ Y+  +    E+  A+IA T V+V VFLPISFM G VG  + +FS+ +A +++ S
Sbjct: 424  EPHLSPYRAVQKVLGEISGAIIAITAVMVSVFLPISFMSGPVGTFYRQFSITMASSIVIS 483

Query: 475  SLIALTLTPVLGSKLLKANV-KPGRFNQL------IDRLFARLESGYRQVVSRAIRWRWA 527
            ++IALTLTPVL + LLK +  +P + N L       +R F +L   Y  +++  +  RW 
Sbjct: 484  AVIALTLTPVLCAMLLKNHHGQPKKSNVLTRTLDGFNRGFDKLTGKYVGLLTSIVSRRWL 543

Query: 528  APVVIAACIGGSYGLMQLVPAQLTPSEDRGVIFSFVR---GADATSYNRMAANMDLVEQR 584
              +++ A   G     Q++P+   P+ED+G I++ ++   G+     N+++  +  V + 
Sbjct: 544  TWIILLAFGAGIVYENQILPSGFIPNEDQGTIYAIIQTPPGSTLEKTNQVSQKLQKVCEE 603

Query: 585  LMPLLGQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKALAGIP 644
            +  +     L  + I +   G NAG      ++ L++W++R  T +E + ++ +   G+ 
Sbjct: 604  IEGVESVSSLAGYEIMTEGRGSNAGT----CLINLKNWSERDHTVKEIMEELEEKSKGLG 659

Query: 645  DVRVF---PFMPGF--RGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDY 699
             V  F   P +PGF   GG +  +      +DY E     ++  +   K   +TG    +
Sbjct: 660  AVIEFFEPPAIPGFGSSGGFSMRLLDKNTETDYHEFDKVNQEFLDNLRKRKELTGLFTFF 719

Query: 700  SEKTPELVVTIDKQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSF 759
            +   P+  + ID   A + G+++    + L +++G      F++ G+ + VY++ D    
Sbjct: 720  AANYPQYELEIDNNLAMQKGVTIDKAMENLNILIGSTYEQGFIKFGQFFKVYVQSDPKFR 779

Query: 760  NNAADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYTLGQA 819
               +D+ ++Y++  +GE+V      ++ +      +  +N   S  I      GYT   A
Sbjct: 780  RLPSDILKLYVKNESGEMVPYSAFMKLKKTQGPNEVTRFNMYNSAAIQGLPAKGYTTADA 839

Query: 820  LDFLDQKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPL 879
            +  + + A+E LP    +++ G S D     +    VF + ++  Y VLAAQ+ESFI PL
Sbjct: 840  IQAIREVAKETLPKGYDIAWEGLSYDEASRGNEALYVFIIVVMFVYFVLAAQYESFIIPL 899

Query: 880  VVMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEF 939
             V+L++P+GVFG FL L +MG   NIY+Q+G+IML+G++ KN +LIVEFA Q R  G   
Sbjct: 900  AVVLSLPVGVFGSFLLLKLMGLENNIYAQVGLIMLVGLLGKNAVLIVEFAVQKRQEGATI 959

Query: 940  EKAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLL 999
              A I+ +  R RPILMT+F  +AG IPLI++TGAG      +G     GM F T+  ++
Sbjct: 960  FDAAIEGAKVRFRPILMTSFAFIAGLIPLIIATGAGAIGNRTIGASALGGMLFGTIFGVV 1019

Query: 1000 VIPAMYRLIS 1009
            ++P +Y + +
Sbjct: 1020 IVPGLYYIFA 1029